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NIPAL1 NIPA like domain containing 1 [ Gallus gallus (chicken) ]

Gene ID: 428783, updated on 17-Aug-2024

Summary

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Symbol
NIPAL1provided by CGNC
Full Name
NIPA like domain containing 1provided by CGNC
Primary source
CGNC:66569
See related
Ensembl:ENSGALG00010016868
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
NPAL1
Orthologs
human mouse all
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Genomic context

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See NIPAL1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
7
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 4 NC_052535.1 (66084326..66093962, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 4 NC_052576.1 (66068402..66078039, complement)

Chromosome 4 - NC_052535.1Genomic Context describing neighboring genes Neighboring gene tec protein tyrosine kinase Neighboring gene TXK tyrosine kinase Neighboring gene cyclic nucleotide gated channel subunit alpha 1 Neighboring gene nuclear transcription factor, X-box binding like 1 Neighboring gene uncharacterized LOC124417970

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables magnesium ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in magnesium ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
magnesium transporter NIPA3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052535.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    66084326..66093962 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004936053.5 → XP_004936110.2  magnesium transporter NIPA3 isoform X2

    UniProtKB/TrEMBL
    A0A8V0YXY8
    Related
    ENSGALP00010023657.1, ENSGALT00010040693.1

  2. XM_046941220.1 → XP_046797176.1  magnesium transporter NIPA3 isoform X1

    UniProtKB/TrEMBL
    A0A8V0YXY4
    Related
    ENSGALP00010023652.1, ENSGALT00010040687.1

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052576.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    66068402..66078039 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040671629.2 → XP_040527563.1  magnesium transporter NIPA3 isoform X2

  2. XM_046917528.1 → XP_046773484.1  magnesium transporter NIPA3 isoform X1

Nucleotide Protein
Heading Accession and Version

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