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LTBP2 latent transforming growth factor beta binding protein 2 [ Gallus gallus (chicken) ]

Gene ID: 428888, updated on 17-Aug-2024

Summary

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Symbol
LTBP2provided by CGNC
Full Name
latent transforming growth factor beta binding protein 2provided by CGNC
Primary source
CGNC:53503
See related
Ensembl:ENSGALG00010004325
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
LTBP3
Orthologs
human mouse all
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Genomic context

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See LTBP2 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
36
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 5 NC_052536.1 (37437806..37498502, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 5 NC_052577.1 (37407623..37468358, complement)

Chromosome 5 - NC_052536.1Genomic Context describing neighboring genes Neighboring gene iron-sulfur cluster assembly 2 Neighboring gene NPC intracellular cholesterol transporter 2 Neighboring gene apoptosis resistant E3 ubiquitin protein ligase 1 Neighboring gene FCF1 rRNA-processing protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
latent-transforming growth factor beta-binding protein 2
Names
latent transforming growth factor beta binding protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052536.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    37437806..37498502 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040701992.1 → XP_040557926.1  latent-transforming growth factor beta-binding protein 2 isoform X6

    Conserved Domains (1) summary
    smart00179
    Location:1096 → 1137
    EGF_CA; Calcium-binding EGF-like domain

  2. XM_040701990.2 → XP_040557924.1  latent-transforming growth factor beta-binding protein 2 isoform X2

    Conserved Domains (2) summary
    smart00179
    Location:1203 → 1244
    EGF_CA; Calcium-binding EGF-like domain
    PHA03379
    Location:53 → 253
    PHA03379; EBNA-3A; Provisional

  3. XM_040701991.2 → XP_040557925.1  latent-transforming growth factor beta-binding protein 2 isoform X4

    Conserved Domains (2) summary
    smart00179
    Location:1187 → 1228
    EGF_CA; Calcium-binding EGF-like domain
    PHA03379
    Location:53 → 253
    PHA03379; EBNA-3A; Provisional

  4. XM_015287677.4 → XP_015143163.3  latent-transforming growth factor beta-binding protein 2 isoform X3

    UniProtKB/TrEMBL
    A0A8V0XM70
    Related
    ENSGALP00010005892.1, ENSGALT00010010088.1
    Conserved Domains (2) summary
    smart00179
    Location:1196 → 1237
    EGF_CA; Calcium-binding EGF-like domain
    PHA03379
    Location:53 → 277
    PHA03379; EBNA-3A; Provisional

  5. XM_015287679.4 → XP_015143165.3  latent-transforming growth factor beta-binding protein 2 isoform X5

    UniProtKB/TrEMBL
    A0A8V0XNX3
    Related
    ENSGALP00010005895.1, ENSGALT00010010092.1
    Conserved Domains (2) summary
    smart00179
    Location:1186 → 1227
    EGF_CA; Calcium-binding EGF-like domain
    PHA03379
    Location:53 → 253
    PHA03379; EBNA-3A; Provisional

  6. XM_015287676.4 → XP_015143162.3  latent-transforming growth factor beta-binding protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A8V0XNW8
    Related
    ENSGALP00010005890.1, ENSGALT00010010083.1
    Conserved Domains (2) summary
    smart00179
    Location:1228 → 1269
    EGF_CA; Calcium-binding EGF-like domain
    PHA03379
    Location:53 → 253
    PHA03379; EBNA-3A; Provisional

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052577.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    37407623..37468358 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040672723.1 → XP_040528657.1  latent-transforming growth factor beta-binding protein 2 isoform X6

    Conserved Domains (1) summary
    smart00179
    Location:1096 → 1137
    EGF_CA; Calcium-binding EGF-like domain

  2. XM_040672719.2 → XP_040528653.1  latent-transforming growth factor beta-binding protein 2 isoform X2

    Conserved Domains (2) summary
    smart00179
    Location:1203 → 1244
    EGF_CA; Calcium-binding EGF-like domain
    PHA03379
    Location:53 → 253
    PHA03379; EBNA-3A; Provisional

  3. XM_040672721.2 → XP_040528655.1  latent-transforming growth factor beta-binding protein 2 isoform X4

    Conserved Domains (2) summary
    smart00179
    Location:1187 → 1228
    EGF_CA; Calcium-binding EGF-like domain
    PHA03379
    Location:53 → 253
    PHA03379; EBNA-3A; Provisional

  4. XM_040672720.2 → XP_040528654.1  latent-transforming growth factor beta-binding protein 2 isoform X3

    Conserved Domains (2) summary
    smart00179
    Location:1196 → 1237
    EGF_CA; Calcium-binding EGF-like domain
    PHA03379
    Location:53 → 253
    PHA03379; EBNA-3A; Provisional

  5. XM_040672722.2 → XP_040528656.1  latent-transforming growth factor beta-binding protein 2 isoform X5

    Conserved Domains (2) summary
    smart00179
    Location:1186 → 1227
    EGF_CA; Calcium-binding EGF-like domain
    PHA03379
    Location:53 → 253
    PHA03379; EBNA-3A; Provisional

  6. XM_040672718.2 → XP_040528652.1  latent-transforming growth factor beta-binding protein 2 isoform X1

    Conserved Domains (2) summary
    smart00179
    Location:1228 → 1269
    EGF_CA; Calcium-binding EGF-like domain
    PHA03379
    Location:53 → 253
    PHA03379; EBNA-3A; Provisional

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001282376.1: Suppressed sequence

    Description
    NM_001282376.1: This RefSeq was suppressed temporarily based on the calculation that the encoded protein was shorter than proteins from the putative ortholog from cow: LTBP2 (GeneID:281905).
Nucleotide Protein Strain
Heading Accession and Version

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