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PCOLCE2 procollagen C-endopeptidase enhancer 2 [ Gallus gallus (chicken) ]

Gene ID: 429124, updated on 17-Aug-2024

Summary

Symbol
PCOLCE2provided by CGNC
Full Name
procollagen C-endopeptidase enhancer 2provided by CGNC
Primary source
CGNC:1888
See related
Ensembl:ENSGALG00010015809
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
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Genomic context

See PCOLCE2 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
9
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 9 NC_052540.1 (10224200..10245933, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 9 NC_052581.1 (10026937..10047241, complement)

Chromosome 9 - NC_052540.1Genomic Context describing neighboring genes Neighboring gene plastin 1 Neighboring gene transient receptor potential cation channel subfamily C member 1 Neighboring gene caskin-1-like Neighboring gene U2 snRNP associated SURP domain containing Neighboring gene microRNA 1458

Genomic regions, transcripts, and products

General protein information

Preferred Names
procollagen C-endopeptidase enhancer 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052540.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    10224200..10245933 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015276963.4XP_015132449.1  procollagen C-endopeptidase enhancer 2 isoform X1

    UniProtKB/TrEMBL
    A0A8V0YLY1, A0A8V0Z027
    Related
    ENSGALP00010021969.1, ENSGALT00010038070.1
    Conserved Domains (3) summary
    cd00041
    Location:35145
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    cd03576
    Location:294417
    NTR_PCOLCE; NTR domain, PCOLCE subfamily; Procollagen C-endopeptidase enhancers (PCOLCEs) are extracellular matrix proteins that enhance the activity of procollagen C-proteases, by binding to the procollagen I C-peptide. They contain a C-terminal NTR domain, which ...
    pfam00431
    Location:156267
    CUB; CUB domain
  2. XM_040706069.2XP_040562003.1  procollagen C-endopeptidase enhancer 2 isoform X2

    UniProtKB/TrEMBL
    A0A8V0YV70, A0A8V0Z027
    Related
    ENSGALP00010021967.1, ENSGALT00010038068.1
    Conserved Domains (2) summary
    cd00041
    Location:24134
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    cd03576
    Location:283406
    NTR_PCOLCE; NTR domain, PCOLCE subfamily; Procollagen C-endopeptidase enhancers (PCOLCEs) are extracellular matrix proteins that enhance the activity of procollagen C-proteases, by binding to the procollagen I C-peptide. They contain a C-terminal NTR domain, which ...

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052581.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    10026937..10047241 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040679382.2XP_040535316.1  procollagen C-endopeptidase enhancer 2 isoform X1

    UniProtKB/TrEMBL
    A0A8V0YLY1, A0A8V0Z027
    Conserved Domains (3) summary
    cd00041
    Location:35145
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    cd03576
    Location:294417
    NTR_PCOLCE; NTR domain, PCOLCE subfamily; Procollagen C-endopeptidase enhancers (PCOLCEs) are extracellular matrix proteins that enhance the activity of procollagen C-proteases, by binding to the procollagen I C-peptide. They contain a C-terminal NTR domain, which ...
    pfam00431
    Location:156267
    CUB; CUB domain
  2. XM_040679383.2XP_040535317.1  procollagen C-endopeptidase enhancer 2 isoform X2

    UniProtKB/TrEMBL
    A0A8V0Z027
    Conserved Domains (2) summary
    cd00041
    Location:24134
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    cd03576
    Location:283406
    NTR_PCOLCE; NTR domain, PCOLCE subfamily; Procollagen C-endopeptidase enhancers (PCOLCEs) are extracellular matrix proteins that enhance the activity of procollagen C-proteases, by binding to the procollagen I C-peptide. They contain a C-terminal NTR domain, which ...