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THAP4 THAP domain containing 4 [ Gallus gallus (chicken) ]

Gene ID: 429271, updated on 3-Dec-2024

Summary

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Official Symbol
THAP4provided by CGNC
Official Full Name
THAP domain containing 4provided by CGNC
Primary source
CGNC:53607
See related
Ensembl:ENSGALG00010024928
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See THAP4 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
9
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 9 NC_052540.1 (4466420..4480759)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 9 NC_052581.1 (4299336..4313693)

Chromosome 9 - NC_052540.1Genomic Context describing neighboring genes Neighboring gene deoxythymidylate kinase Neighboring gene autophagy related 4B cysteine peptidase Neighboring gene espin-like Neighboring gene kelch like family member 30

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
THAP domain-containing protein 4; peroxynitrite isomerase THAP4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052540.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    4466420..4480759
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015277108.4 → XP_015132594.2  peroxynitrite isomerase THAP4 isoform X5

    UniProtKB/TrEMBL
    A0A3Q2U2D5
    Related
    ENSGALP00010037641.1, ENSGALT00010060884.1

  2. XM_015277105.4 → XP_015132591.3  peroxynitrite isomerase THAP4 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZVR0
    Related
    ENSGALP00010037643.1, ENSGALT00010060886.1
    Conserved Domains (3) summary
    smart00980
    Location:101 → 160
    THAP; The THAP domain is a putative DNA-binding domain (DBD) and probably also binds a zinc ion
    PHA03378
    Location:20 → 101
    PHA03378; EBNA-3B; Provisional
    cd07828
    Location:495 → 648
    lipocalin_heme-bd-THAP4-like; heme-binding beta-barrel domain of human THAP4, Arabidopsis thaliana nitrobindin, and similar proteins

  3. XM_004937005.5 → XP_004937062.2  peroxynitrite isomerase THAP4 isoform X3

    UniProtKB/TrEMBL
    A0A8V1A8E3
    Conserved Domains (1) summary
    cd07828
    Location:47 → 200
    lipocalin_heme-bd-THAP4-like; heme-binding beta-barrel domain of human THAP4, Arabidopsis thaliana nitrobindin, and similar proteins

  4. XM_003641747.6 → XP_003641795.2  peroxynitrite isomerase THAP4 isoform X4

    See identical proteins and their annotated locations for XP_003641795.2

    UniProtKB/TrEMBL
    A0A8V1A8E3
    Related
    ENSGALP00010037639.1, ENSGALT00010060882.1
    Conserved Domains (1) summary
    cd07828
    Location:17 → 170
    lipocalin_heme-bd-THAP4-like; heme-binding beta-barrel domain of human THAP4, Arabidopsis thaliana nitrobindin, and similar proteins

  5. XM_040705822.2 → XP_040561756.1  peroxynitrite isomerase THAP4 isoform X2

    UniProtKB/TrEMBL
    A0A8V1A8E3
    Conserved Domains (1) summary
    cd07828
    Location:48 → 201
    lipocalin_heme-bd-THAP4-like; heme-binding beta-barrel domain of human THAP4, Arabidopsis thaliana nitrobindin, and similar proteins

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052581.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    4299336..4313693
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040678931.2 → XP_040534865.1  peroxynitrite isomerase THAP4 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZVR0
    Conserved Domains (3) summary
    smart00980
    Location:101 → 160
    THAP; The THAP domain is a putative DNA-binding domain (DBD) and probably also binds a zinc ion
    PRK04537
    Location:9 → 82
    PRK04537; ATP-dependent RNA helicase RhlB; Provisional
    cd07828
    Location:495 → 648
    lipocalin_heme-bd-THAP4-like; heme-binding beta-barrel domain of human THAP4, Arabidopsis thaliana nitrobindin, and similar proteins

  2. XM_040678932.2 → XP_040534866.1  peroxynitrite isomerase THAP4 isoform X6

    UniProtKB/TrEMBL
    A0A3Q2U2D5
    Conserved Domains (2) summary
    smart00980
    Location:4 → 85
    THAP; The THAP domain is a putative DNA-binding domain (DBD) and probably also binds a zinc ion
    cd07828
    Location:420 → 573
    lipocalin_heme-bd-THAP4-like; heme-binding beta-barrel domain of human THAP4, Arabidopsis thaliana nitrobindin, and similar proteins

  3. XM_040678934.2 → XP_040534868.1  peroxynitrite isomerase THAP4 isoform X3

    UniProtKB/TrEMBL
    A0A8V1A8E3
    Conserved Domains (1) summary
    cd07828
    Location:47 → 200
    lipocalin_heme-bd-THAP4-like; heme-binding beta-barrel domain of human THAP4, Arabidopsis thaliana nitrobindin, and similar proteins

  4. XM_040678935.2 → XP_040534869.1  peroxynitrite isomerase THAP4 isoform X4

    UniProtKB/TrEMBL
    A0A8V1A8E3
    Conserved Domains (1) summary
    cd07828
    Location:17 → 170
    lipocalin_heme-bd-THAP4-like; heme-binding beta-barrel domain of human THAP4, Arabidopsis thaliana nitrobindin, and similar proteins

  5. XM_040678933.2 → XP_040534867.1  peroxynitrite isomerase THAP4 isoform X2

    UniProtKB/TrEMBL
    A0A8V1A8E3
    Conserved Domains (1) summary
    cd07828
    Location:48 → 201
    lipocalin_heme-bd-THAP4-like; heme-binding beta-barrel domain of human THAP4, Arabidopsis thaliana nitrobindin, and similar proteins
Nucleotide Protein Strain
Heading Accession and Version

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