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WDR19 WD repeat domain 19 [ Gallus gallus (chicken) ]

Gene ID: 430829, updated on 17-Aug-2024

Summary

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Symbol
WDR19provided by CGNC
Full Name
WD repeat domain 19provided by CGNC
Primary source
CGNC:10496
See related
Ensembl:ENSGALG00010013532
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See WDR19 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
37
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 4 NC_052535.1 (68868227..68907782, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 4 NC_052576.1 (68853829..68893152, complement)

Chromosome 4 - NC_052535.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein L9 Neighboring gene klotho beta Neighboring gene replication factor C subunit 1 Neighboring gene kelch like family member 5 Neighboring gene transmembrane protein 156

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intraciliary retrograde transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of intraciliary transport particle A IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WD repeat-containing protein 19

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052535.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    68868227..68907782 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015285660.4 → XP_015141146.3  WD repeat-containing protein 19 isoform X1

    UniProtKB/TrEMBL
    A0A8V0YSX7
    Related
    ENSGALP00010019302.1, ENSGALT00010032581.1
    Conserved Domains (4) summary
    COG2319
    Location:28 → 338
    WD40; WD40 repeat [General function prediction only]
    sd00006
    Location:779 → 807
    TPR; TPR repeat [structural motif]
    sd00039
    Location:15 → 74
    7WD40; WD40 repeat [structural motif]
    cl26078
    Location:913 → 966
    Clathrin; Region in Clathrin and VPS

  2. XM_040699816.1 → XP_040555750.1  WD repeat-containing protein 19 isoform X2

    UniProtKB/TrEMBL
    A0A8V0YKF3
    Related
    ENSGALP00010019292.1, ENSGALT00010032567.1
    Conserved Domains (3) summary
    sd00039
    Location:72 → 110
    7WD40; WD40 repeat [structural motif]
    cl26078
    Location:753 → 806
    Clathrin; Region in Clathrin and VPS
    cl29593
    Location:49 → 177
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  3. XM_040699817.1 → XP_040555751.1  WD repeat-containing protein 19 isoform X3

    UniProtKB/TrEMBL
    A0A8V0YKF3
    Conserved Domains (3) summary
    COG2319
    Location:26 → 401
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:49 → 87
    7WD40; WD40 repeat [structural motif]
    cl26078
    Location:730 → 783
    Clathrin; Region in Clathrin and VPS

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052576.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    68853829..68893152 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040671136.2 → XP_040527070.1  WD repeat-containing protein 19 isoform X1

    UniProtKB/TrEMBL
    A0A8V0YSX7
    Conserved Domains (4) summary
    COG2319
    Location:28 → 338
    WD40; WD40 repeat [General function prediction only]
    sd00006
    Location:779 → 807
    TPR; TPR repeat [structural motif]
    sd00039
    Location:15 → 74
    7WD40; WD40 repeat [structural motif]
    cl26078
    Location:913 → 966
    Clathrin; Region in Clathrin and VPS

  2. XM_040671137.1 → XP_040527071.1  WD repeat-containing protein 19 isoform X2

    UniProtKB/TrEMBL
    A0A8V0YKF3
    Conserved Domains (3) summary
    sd00039
    Location:72 → 110
    7WD40; WD40 repeat [structural motif]
    cl26078
    Location:753 → 806
    Clathrin; Region in Clathrin and VPS
    cl29593
    Location:49 → 177
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  3. XM_040671138.1 → XP_040527072.1  WD repeat-containing protein 19 isoform X3

    UniProtKB/TrEMBL
    A0A8V0YKF3
    Conserved Domains (3) summary
    COG2319
    Location:26 → 401
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:49 → 87
    7WD40; WD40 repeat [structural motif]
    cl26078
    Location:730 → 783
    Clathrin; Region in Clathrin and VPS
Nucleotide Protein
Heading Accession and Version

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