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RpL4 Ribosomal protein L4 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 43349, updated on 4-Jan-2025

Summary

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Official Symbol
RpL4provided by FlyBase
Official Full Name
Ribosomal protein L4provided by FlyBase
Primary source
FLYBASE:FBgn0003279
Locus tag
Dmel_CG5502
See related
AllianceGenome:FB:FBgn0003279
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
anon-WO0172774.76; CG5502; chr3R:23749174..23749334; Dmel\CG5502; L4; Rp L4; rpL1; RpL1
Summary
A structural constituent of ribosome. Predicted to be involved in cytoplasmic translation. Located in cytosolic ribosome. Is expressed in adult head; adult heart; organism; and spermatozoon. Orthologous to human RPL4 (ribosomal protein L4). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
all
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Genomic context

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See RpL4 in Genome Data Viewer
Location:
98B6-98B6; 3-94 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (27922821..27924888)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (23748543..23750610)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene BCAS2 Neighboring gene ncRNA Neighboring gene long non-coding RNA:CR45566 Neighboring gene minotaur Neighboring gene nenya Neighboring gene antisense RNA:CR46452

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence of the ribosomal protein cDNA of D. melanogaster homologous to the L1 ribosomal protein gene of X. laevis. Rafti F, et al. Nucleic Acids Res, 1989 Jan 11. PMID 2492096, Free PMC Article
  2. Isolation and structural analysis of a ribosomal protein gene in D.melanogaster. Rafti F, et al. Nucleic Acids Res, 1988 Jun 10. PMID 3133637, Free PMC Article
  3. Isolation and mapping of a cloned ribosomal protein gene of Drosophila melanogaster. Vaslet CA, et al. Nature, 1980 Jun 26. PMID 6771656
  4. The Zinc-BED Transcription Factor Bedwarfed Promotes Proportional Dendritic Growth and Branching through Transcriptional and Translational Regulation in Drosophila. Bhattacharjee S, et al. Int J Mol Sci, 2023 Mar 28. PMID 37047316, Free PMC Article
  5. Attenuated Codon Optimality Contributes to Neural-Specific mRNA Decay in Drosophila. Burow DA, et al. Cell Rep, 2018 Aug 14. PMID 30110627, Free PMC Article

See all (82) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables RNA binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables structural constituent of ribosome HDA PubMed 
enables structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
  
enables structural constituent of ribosome IDA
Inferred from Direct Assay
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
  
enables structural constituent of ribosome TAS
Traceable Author Statement
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytoplasmic translation IC
Inferred by Curator
more info
 PubMed 
involved_in cytoplasmic translation TAS
Traceable Author Statement
more info
 PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of cytosolic large ribosomal subunit TAS
Traceable Author Statement
more info
 PubMed 
located_in cytosolic ribosome HDA PubMed 
located_in cytosolic ribosome IDA
Inferred from Direct Assay
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
ribosomal protein L4
Names
60S RIBOSOMAL PROTEIN L4
CG5502-PA
RpL4-PA
ribosomal protein L1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    27922821..27924888
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_079814.3 → NP_524538.2  ribosomal protein L4 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_524538.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P09180, Q9I7H6
    Related
    FBpp0084617
    Conserved Domains (1) summary
    PTZ00428
    Location:6 → 383
    PTZ00428; 60S ribosomal protein L4; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P09180.2 P09180

Gene LinkOut

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