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CG9988 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 43388, updated on 28-Oct-2024

Summary

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Official Symbol
CG9988provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0039591
Locus tag
Dmel_CG9988
See related
AllianceGenome:FB:FBgn0039591
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG9988; gi23172514
Orthologs
all
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Genomic context

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See CG9988 in Genome Data Viewer
Location:
98D7-98D7; 3-96 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (28636411..28638799)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (24462133..24464521)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Heterogeneous nuclear ribonucleoprotein at 98DE Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene pseudo Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new domain family in the superfamily of alkaline phosphatases. Bhadra R, et al. In Silico Biol, 2005. PMID 16268782
  2. Gepoclu: a software tool for identifying and analyzing gene positional clusters in large-scale gene expression analysis. Dottorini T, et al. BMC Bioinformatics, 2011 Jan 26. PMID 21269436, Free PMC Article
  3. Cold acclimation wholly reorganizes the Drosophila melanogaster transcriptome and metabolome. MacMillan HA, et al. Sci Rep, 2016 Jun 30. PMID 27357258, Free PMC Article
  4. mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster. Lepennetier G, et al. G3 (Bethesda), 2016 Jun 1. PMID 27172210, Free PMC Article
  5. CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans. Wei P, et al. Genome Res, 2020 Jan. PMID 31722958, Free PMC Article

See all (21) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein
Names
CG9988-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    28636411..28638799
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_143368.3 → NP_651625.1  uncharacterized protein Dmel_CG9988 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_651625.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q6NR35, Q9VAU4
    Related
    FBpp0084674
    Conserved Domains (2) summary
    pfam02995
    Location:90 → 580
    DUF229; Protein of unknown function (DUF229)
    cd16021
    Location:212 → 493
    ALP_like; uncharacterized Alkaline phosphatase subfamily
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6NR35 Q6NR35
Q9VAU4 Q9VAU4

Gene LinkOut

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