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htt huntingtin [ Drosophila melanogaster (fruit fly) ]

Gene ID: 43392, updated on 9-Dec-2024

Summary

Official Symbol
httprovided by FlyBase
Official Full Name
huntingtinprovided by FlyBase
Primary source
FLYBASE:FBgn0027655
Locus tag
Dmel_CG9995
See related
AllianceGenome:FB:FBgn0027655
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG9995; dhtt; dHtt; Dmel\CG9995; DmHtt; HD; Htt; HTT
Summary
Involved in several processes, including establishment of mitotic spindle orientation; heterochromatin boundary formation; and synaptic vesicle transport. Located in cytoplasm. Is expressed in imaginal disc; larval central nervous system; and organism. Used to study Huntington's disease and neurodegenerative disease. Human ortholog(s) of this gene implicated in Huntington's disease and Parkinson's disease. Orthologous to human HTT (huntingtin). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

See htt in Genome Data Viewer
Location:
98E2-98E2; 3-97 cM
Exon count:
29
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (28696242..28734816)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (24521964..24560411)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Stress induced DNase Neighboring gene snustorr Neighboring gene Allatostatin A receptor 2 Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
huntingtin
Names
CG9995-PA
CG9995-PB
htt-PA
htt-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    28696242..28734816
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001276112.2NP_001263041.1  huntingtin, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001263041.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9U999, Q9V3N4
    Conserved Domains (1) summary
    pfam12372
    Location:27262757
    DUF3652; Huntingtin protein region
  2. NM_143372.2NP_651629.1  huntingtin, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_651629.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9U999, Q9V3N4
    Related
    FBpp0084679
    Conserved Domains (1) summary
    pfam12372
    Location:27262757
    DUF3652; Huntingtin protein region