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Ssl2 Strictosidine synthase-like 2 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 43424, updated on 9-Dec-2024

Summary

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Official Symbol
Ssl2provided by FlyBase
Official Full Name
Strictosidine synthase-like 2provided by FlyBase
Primary source
FLYBASE:FBgn0041780
Locus tag
Dmel_CG11833
See related
AllianceGenome:FB:FBgn0041780
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG11833; Dmel\CG11833; DmSSl2; SSl2
Summary
Predicted to enable arylesterase activity. Predicted to be involved in biosynthetic process. Orthologous to human APMAP (adipocyte plasma membrane associated protein). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

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See Ssl2 in Genome Data Viewer
Location:
98F5-98F5; 3-97 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (29030951..29032642, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (24856673..24858364, complement)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 4E6 Neighboring gene uncharacterized protein Neighboring gene antisense RNA:CR45044 Neighboring gene beta1,4-N-acetylgalactosaminyltransferase B Neighboring gene Cleavage and polyadenylation specificity factor 100 Neighboring gene Slu7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Animal and plant members of a gene family with similarity to alkaloid-synthesizing enzymes. Fabbri M, et al. Biochem Biophys Res Commun, 2000 Apr 29. PMID 10777701
  2. Population genomics of inversion polymorphisms in Drosophila melanogaster. Corbett-Detig RB, et al. PLoS Genet, 2012. PMID 23284285, Free PMC Article
  3. The Effect of Common Inversion Polymorphisms In(2L)t and In(3R)Mo on Patterns of Transcriptional Variation in Drosophila melanogaster. Lavington E, et al. G3 (Bethesda), 2017 Nov 6. PMID 28916647, Free PMC Article
  4. The Drosophila clotting system and its messages for mammals. Theopold U, et al. Dev Comp Immunol, 2014 Jan. PMID 23545286
  5. Insights from natural host-parasite interactions: the Drosophila model. Keebaugh ES, et al. Dev Comp Immunol, 2014 Jan. PMID 23764256, Free PMC Article

See all (25) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables arylesterase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables hydrolase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables strictosidine synthase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in biosynthetic process IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
strictosidine synthase-like 2
Names
CG11833-PB
Ssl2-PB
strictosidine-synthase-like protein2
NP_651656.2

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    29030951..29032642 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_143399.3 → NP_651656.2  strictosidine synthase-like 2 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_651656.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VAQ9
    Conserved Domains (2) summary
    COG3386
    Location:80 → 284
    YvrE; Sugar lactone lactonase YvrE [Carbohydrate transport and metabolism]
    cl22863
    Location:174 → 256
    Str_synth; Strictosidine synthase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VAQ9 Q9VAQ9

Gene LinkOut

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