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Vmn2r23 vomeronasal 2, receptor 23 [ Mus musculus (house mouse) ]

Gene ID: 435916, updated on 4-Jan-2025

Summary

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Official Symbol
Vmn2r23provided by MGI
Official Full Name
vomeronasal 2, receptor 23provided by MGI
Primary source
MGI:MGI:3646826
See related
Ensembl:ENSMUSG00000091620 AllianceGenome:MGI:3646826
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
EG435916
Summary
Predicted to enable G protein-coupled receptor activity. Predicted to be active in plasma membrane. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See Vmn2r23 in Genome Data Viewer
Location:
6 F2; 6 58.75 cM
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (123679780..123719198)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (123702821..123742239)

Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene vomeronasal 2, receptor 22 Neighboring gene predicted gene, 25065 Neighboring gene STARR-seq mESC enhancer starr_17277 Neighboring gene STARR-seq mESC enhancer starr_17278 Neighboring gene predicted gene, 18374 Neighboring gene STARR-seq mESC enhancer starr_17279 Neighboring gene predicted gene, 22724 Neighboring gene vomeronasal 2, receptor 24 Neighboring gene STARR-seq mESC enhancer starr_17280 Neighboring gene myeloid cell leukemia sequence 1 pseudogene Neighboring gene predicted gene, 23079

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Olfactory receptors and signalling elements in the Grueneberg ganglion. Fleischer J, et al. J Neurochem, 2006 Jul. PMID 16805845
  2. V2R gene families degenerated in primates, dog and cow, but expanded in opossum. Young JM, et al. Trends Genet, 2007 May. PMID 17382427
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

General gene information

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Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables G protein-coupled receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
vomeronasal 2, receptor 23
Names
vomeronasal receptor Vmn2r23

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001104638.1 → NP_001098108.1  vomeronasal 2, receptor 23 precursor

    See identical proteins and their annotated locations for NP_001098108.1

    Status: PROVISIONAL

    Source sequence(s)
    AC121775
    Consensus CDS
    CCDS51901.1
    UniProtKB/TrEMBL
    E9PXI5
    Related
    ENSMUSP00000126682.3, ENSMUST00000172391.4
    Conserved Domains (3) summary
    cd06365
    Location:37 → 505
    PBP1_Pheromone_receptor; Ligand-binding domain of the V2R phermone receptor, a member of the family C receptors within the G-protein coupled receptor superfamily
    pfam00003
    Location:600 → 834
    7tm_3; 7 transmembrane sweet-taste receptor of 3 GCPR
    pfam07562
    Location:515 → 565
    NCD3G; Nine Cysteines Domain of family 3 GPCR

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000072.7 Reference GRCm39 C57BL/6J

    Range
    123679780..123719198
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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