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mRpS18C mitochondrial ribosomal protein S18C [ Drosophila melanogaster (fruit fly) ]

Gene ID: 43609, updated on 9-Dec-2024

Summary

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Official Symbol
mRpS18Cprovided by FlyBase
Official Full Name
mitochondrial ribosomal protein S18Cprovided by FlyBase
Primary source
FLYBASE:FBgn0039765
Locus tag
Dmel_CG9688
See related
AllianceGenome:FB:FBgn0039765
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG9688; Dmel\CG9688; MRP-S18-(1); mRpS18a
Summary
Predicted to enable small ribosomal subunit rRNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be located in ribosome. Predicted to be part of mitochondrial small ribosomal subunit. Is expressed in adult head; adult heart; embryonic/larval midgut; and organism. Orthologous to human MRPS18C (mitochondrial ribosomal protein S18C). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

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See mRpS18C in Genome Data Viewer
Location:
99F4-99F4; 3-100 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (30423974..30424556)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (26249696..26250278)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic interactions of separase regulatory subunits reveal the diverged Drosophila Cenp-C homolog. Heeger S, et al. Genes Dev, 2005 Sep 1. PMID 16140985, Free PMC Article
  2. Genome-Wide Analysis of Drosophila RBf2 Protein Highlights the Diversity of RB Family Targets and Possible Role in Regulation of Ribosome Biosynthesis. Wei Y, et al. G3 (Bethesda), 2015 May 20. PMID 25999584, Free PMC Article
  3. The small subunit of the mammalian mitochondrial ribosome. Identification of the full complement of ribosomal proteins present. Cavdar Koc E, et al. J Biol Chem, 2001 Jun 1. PMID 11279123
  4. Identification of novel modulators of mitochondrial function by a genome-wide RNAi screen in Drosophila melanogaster. Chen J, et al. Genome Res, 2008 Jan. PMID 18042644, Free PMC Article
  5. The SIN3 deacetylase complex represses genes encoding mitochondrial proteins: implications for the regulation of energy metabolism. Pile LA, et al. J Biol Chem, 2003 Sep 26. PMID 12865422

See all (35) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables small ribosomal subunit rRNA binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
  
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
  
enables structural constituent of ribosome ISS
Inferred from Sequence or Structural Similarity
more info
  
enables structural constituent of ribosome TAS
Traceable Author Statement
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial translation TAS
Traceable Author Statement
more info
 PubMed 
involved_in translation IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in translation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of mitochondrial small ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of mitochondrial small ribosomal subunit ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
part_of mitochondrial small ribosomal subunit TAS
Traceable Author Statement
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
mitochondrial ribosomal protein S18C
Names
CG9688-PA
mRpS18C-PA
mitochondrial ribosomal protein S18a

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    30423974..30424556
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_079854.2 → NP_524593.1  mitochondrial ribosomal protein S18C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_524593.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VA81
    Related
    FBpp0084989
    Conserved Domains (1) summary
    pfam01084
    Location:61 → 113
    Ribosomal_S18; Ribosomal protein S18
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VA81 Q9VA81

Gene LinkOut

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