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BDW43DRAFT_76852 fungal-specific transcription factor domain-containing protein [ Aspergillus alliaceus ]

Gene ID: 43634461, updated on 31-Oct-2024

Summary

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Gene symbol
BDW43DRAFT_76852
Gene description
fungal-specific transcription factor domain-containing protein
Locus tag
BDW43DRAFT_76852
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aspergillus alliaceus (strain: CBS 536.65, culture-collection: CBS:536.65, type-material: culture from type material of Aspergillus alliaceus)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus
Orthologs
Aspergillus fumigatus all
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Genomic context

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See BDW43DRAFT_76852 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
4

NW_022474685.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene CrcB-like protein-domain-containing protein Neighboring gene uracil phosphoribosyltransferase-domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022474685.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
fungal-specific transcription factor domain-containing protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_022474685.1 Reference assembly

    Range
    1642985..1646370
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032050490.1 → XP_031906106.1  fungal-specific transcription factor domain-containing protein [Aspergillus alliaceus]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A5N6GDK0, A0A5N7CQ88, A0A8H6A4I2
    Conserved Domains (3) summary
    COG5048
    Location:3 → 75
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:26 → 46
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam04082
    Location:318 → 515
    Fungal_trans; Fungal specific transcription factor domain
Nucleotide Protein
Heading Accession and Version

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