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faimb Fas apoptotic inhibitory molecule b [ Danio rerio (zebrafish) ]

Gene ID: 436668, updated on 4-Jan-2025

Summary

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Official Symbol
faimbprovided by ZNC
Official Full Name
Fas apoptotic inhibitory molecule bprovided by ZNC
Primary source
ZFIN:ZDB-GENE-040718-91
See related
Ensembl:ENSDARG00000020814 AllianceGenome:ZFIN:ZDB-GENE-040718-91
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:92712
Summary
Predicted to act upstream of or within negative regulation of apoptotic process. Is expressed in epiphysis and retinal photoreceptor layer. Orthologous to human FAIM (Fas apoptotic inhibitory molecule). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
all
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Genomic context

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See faimb in Genome Data Viewer
Location:
chromosome: 6
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 6 NC_007117.7 (16400049..16406213, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 6 NC_007117.6 (16273104..16279270, complement)

Chromosome 6 - NC_007117.7Genomic Context describing neighboring genes Neighboring gene gastrulation brain homeobox 2 Neighboring gene ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 Neighboring gene coiled-coil domain containing 80 like 1 Neighboring gene solute carrier family 19 member 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within negative regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
Fas apoptotic inhibitory molecule b; fas apoptotic inhibitory molecule b

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001002395.2 → NP_001002395.1  Fas apoptotic inhibitory molecule b

    See identical proteins and their annotated locations for NP_001002395.1

    Status: VALIDATED

    Source sequence(s)
    CR854926
    UniProtKB/TrEMBL
    A0A8M1N0G7, Q6DGZ2
    Related
    ENSDARP00000008711.7, ENSDART00000012023.8
    Conserved Domains (1) summary
    pfam06905
    Location:4 → 175
    FAIM1; Fas apoptotic inhibitory molecule (FAIM1)

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007117.7 Reference GRCz11 Primary Assembly

    Range
    16400049..16406213 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005168710.5 → XP_005168767.1  fas apoptotic inhibitory molecule b isoform X1

    UniProtKB/TrEMBL
    A0A8M2BG05
    Conserved Domains (1) summary
    pfam06905
    Location:4 → 177
    FAIM1; Fas apoptotic inhibitory molecule (FAIM1)
Nucleotide Protein
Heading Accession and Version

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