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CG31998 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 43774, updated on 9-Dec-2024

Summary

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Official Symbol
CG31998provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0051998
Locus tag
Dmel_CG31998
See related
AllianceGenome:FB:FBgn0051998
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG11572; CG11578; Dmel\CG31998
Summary
Is expressed in adult head and organism. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See CG31998 in Genome Data Viewer
Location:
102A7-102A7; 4-0 cM
Exon count:
5
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 4 NC_004353.4 (196675..205945, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 4 NC_004353.3 (217301..226571, complement)

Chromosome 4 - NC_004353.4Genomic Context describing neighboring genes Neighboring gene ATP binding cassette subfamily D member 1 Neighboring gene long non-coding RNA:CR44441 Neighboring gene Crk oncogene Neighboring gene uncharacterized protein Neighboring gene pseudo

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Cell-Surface Proteomic Profiling in the Fly Brain Uncovers Wiring Regulators. Li J, et al. Cell, 2020 Jan 23. PMID 31955847, Free PMC Article
  2. Painting of fourth and chromosome-wide regulation of the 4th chromosome in Drosophila melanogaster. Johansson AM, et al. EMBO J, 2007 May 2. PMID 17318176, Free PMC Article
  3. Gene transposition as a cause of hybrid sterility in Drosophila. Masly JP, et al. Science, 2006 Sep 8. PMID 16960009
  4. High-resolution mapping of the Drosophila fourth chromosome using site-directed terminal deficiencies. Sousa-Neves R, et al. Genetics, 2005 May. PMID 15466427, Free PMC Article
  5. Genes expressed in the Drosophila head reveal a role for fat cells in sex-specific physiology. Fujii S, et al. EMBO J, 2002 Oct 15. PMID 12374736, Free PMC Article

See all (29) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

mobile_element

  • Loc: c202025-201844 mobile_element_type = transposon:INE-1{}4846
  • Loc: c202879-202037 mobile_element_type = transposon:1360{}5391

General protein information

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Preferred Names
uncharacterized protein
Names
CG31998-PA
CG31998-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004353.4 Reference assembly

    Range
    196675..205945 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001258481.2 → NP_001245410.1  uncharacterized protein Dmel_CG31998, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001245410.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    H9XVM5
    Conserved Domains (1) summary
    cl03905
    Location:514 → 628
    EXS; EXS family

  2. NM_166742.3 → NP_726548.1  uncharacterized protein Dmel_CG31998, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_726548.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9V4B6
    Related
    FBpp0088212
    Conserved Domains (1) summary
    cl03905
    Location:610 → 724
    EXS; EXS family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
H9XVM5 H9XVM5
Q8MR35 Q8MR35
Q9V4B6 Q9V4B6

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