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CG34140 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 4379908, updated on 9-Dec-2024

Summary

Official Symbol
CG34140provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0083976
Locus tag
Dmel_CG34140
See related
AllianceGenome:FB:FBgn0083976
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG7042; Dmel\CG34140
Summary
Predicted to enable pseudouridine synthase activity. Predicted to be involved in tRNA pseudouridine synthesis. Predicted to be located in mitochondrion. Is expressed in organism. Orthologous to human PUSL1 (pseudouridine synthase like 1). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

See CG34140 in Genome Data Viewer
Location:
61B2-61B2; 3-1 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (182522..184424, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (182522..184422, complement)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene antisense RNA:CR45806 Neighboring gene uncharacterized protein Neighboring gene Vitamin D[[3]] up-regulated protein 1 Neighboring gene uncharacterized protein Neighboring gene MAP kinase-specific phosphatase Neighboring gene Mitochondrial carrier homolog 1 Neighboring gene rhinoceros

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables RNA binding  
enables pseudouridine synthase activity  
enables pseudouridine synthase activity  
Process Evidence Code Pubs
involved_in pseudouridine synthesis  
involved_in tRNA pseudouridine synthesis  
Component Evidence Code Pubs
located_in mitochondrial matrix PubMed 
located_in mitochondrion  

General protein information

Preferred Names
uncharacterized protein
Names
CG34140-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    182522..184424 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001043109.2 → NP_001036574.1  uncharacterized protein Dmel_CG34140 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001036574.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q0E8K6
    Conserved Domains (2) summary
    cd02570
    Location:6 → 301
    PseudoU_synth_EcTruA; Eukaryotic and bacterial pseudouridine synthases similar to E. coli TruA
    PRK00021
    Location:1 → 301
    truA; tRNA pseudouridine synthase A; Validated
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