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ect ectodermal [ Drosophila melanogaster (fruit fly) ]

Gene ID: 44135, updated on 9-Dec-2024

Summary

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Official Symbol
ectprovided by FlyBase
Official Full Name
ectodermalprovided by FlyBase
Primary source
FLYBASE:FBgn0000451
Locus tag
Dmel_CG6611
See related
AllianceGenome:FB:FBgn0000451
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG11965; CG6611; Difl; Dmel\CG6611; DROECT; Ifl
Summary
Involved in cuticle development and tube development. Is expressed in several structures, including embryonic anal pad; embryonic head epidermis; embryonic hypopharynx; epidermis; and gut section. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See ect in Genome Data Viewer
Location:
67D10-67D10; 3-32 cM
Exon count:
9
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (10190276..10201837, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (10183376..10194937, complement)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene defective proboscis extension response 10 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene long non-coding RNA:CR44538 Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Molecular and developmental analyses of the protein encoded by the Drosophila gene ectodermal. Raha D, et al. Dev Genet, 1990. PMID 2090376
  2. DNA homology between the 3'-untranslated regions of a developmentally regulated Drosophila gene and a mouse alpha-interferon gene. Nakanishi Y, et al. Gene, 1986. PMID 3026929
  3. An Ichor-dependent apical extracellular matrix regulates seamless tube shape and integrity. Rosa JB, et al. PLoS Genet, 2018 Jan. PMID 29309404, Free PMC Article
  4. Effect of heritable symbionts on maternally-derived embryo transcripts. Mateos M, et al. Sci Rep, 2019 Jun 20. PMID 31222094, Free PMC Article
  5. The Gene Expression Program for the Formation of Wing Cuticle in Drosophila. Sobala LF, et al. PLoS Genet, 2016 May. PMID 27232182, Free PMC Article

See all (36) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in cuticle development IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in tube development IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  
NOT located_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
ectodermal
Names
CG6611-PA
CG6611-PB
CG6611-PD
CG6611-PE
CG6611-PF
Interferon-like protein
ect-PA
ect-PB
ect-PD
ect-PE
ect-PF

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    10190276..10201837 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_079967.6 → NP_524706.2  ectodermal, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_524706.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    F0JAP6, Q7K1N5
    Related
    FBpp0076034

  2. NM_001274748.1 → NP_001261677.1  ectodermal, isoform E [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001261677.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F0JAP6, M9PHZ2

  3. NM_168400.3 → NP_729596.1  ectodermal, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_729596.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F0JAP6, Q7K1N5
    Related
    FBpp0076036

  4. NM_001300090.1 → NP_001287019.1  ectodermal, isoform F [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001287019.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F0JAP6, X2JAX9

  5. NM_168401.3 → NP_729597.2  ectodermal, isoform D [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_729597.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q86NQ6, Q8IQD9
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
M9PHZ2 M9PHZ2
Q7K1N5 Q7K1N5
Q8IQD9 Q8IQD9
X2JAX9 X2JAX9

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