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ANKRD20A2P ankyrin repeat domain 20 family member A2, pseudogene [ Homo sapiens (human) ]

Gene ID: 441430, updated on 10-Dec-2024

Summary

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Official Symbol
ANKRD20A2Pprovided by HGNC
Official Full Name
ankyrin repeat domain 20 family member A2, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:31979
See related
Ensembl:ENSG00000290718 AllianceGenome:HGNC:31979
Gene type
pseudo
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
ANKRD20A2
Expression
Biased expression in testis (RPKM 5.4), thyroid (RPKM 0.9) and 12 other tissues See more
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Genomic context

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See ANKRD20A2P in Genome Data Viewer
Location:
9p11.2
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (40222102..40282358)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (40237964..40297265)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102724431 Neighboring gene meprin A subunit alpha pseudogene 1 Neighboring gene uncharacterized LOC105369249 Neighboring gene RNA, U6 small nuclear 1269, pseudogene Neighboring gene sorting nexin 18 pseudogene 8 Neighboring gene family with sequence similarity 95 member B1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

Bibliography

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Related articles in PubMed

  1. DNA sequence and analysis of human chromosome 9. Humphray SJ, et al. Nature, 2004 May 27. PMID 15164053, Free PMC Article
  2. Dual proteome-scale networks reveal cell-specific remodeling of the human interactome. Huttlin EL, et al. Cell, 2021 May 27. PMID 33961781, Free PMC Article
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh38)

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Other Names

  • ankyrin repeat domain 20 family, member A2
  • ankyrin repeat domain-containing protein 20A2

Clone Names

  • MGC176486

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    40222102..40282358
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_004837502.2 RNA Sequence

  2. XR_007061496.1 RNA Sequence

  3. XR_004837499.2 RNA Sequence

  4. XR_004837500.2 RNA Sequence

  5. XR_004837501.2 RNA Sequence

    Related
    ENST00000673925.2

  6. XR_004837503.2 RNA Sequence

    Related
    ENST00000809082.1

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    40237964..40297265
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_008488120.1 RNA Sequence

  2. XR_008488121.1 RNA Sequence

  3. XR_008488122.1 RNA Sequence

  4. XR_008488123.1 RNA Sequence

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001012421.1: Suppressed sequence

    Description
    NM_001012421.1: This RefSeq was removed because it is now thought that this gene is a pseudogene.
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5SQ80.1 GenPept UniProtKB/Swiss-Prot:Q5SQ80

Gene LinkOut

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