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Crtp Caldesmon-related protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 44276, updated on 4-Jan-2025

Summary

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Official Symbol
Crtpprovided by FlyBase
Official Full Name
Caldesmon-related proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0029501
Locus tag
Dmel_CG13580
See related
AllianceGenome:FB:FBgn0029501
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG13580; Dmel\CG13580
Summary
Is expressed in spermatozoon. [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
all
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Genomic context

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See Crtp in Genome Data Viewer
Location:
60D1-60D1; 2-107 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (24494518..24497024)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (20382041..20384547)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:Yu Neighboring gene Suppressor of Stellate-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Silencing of Euchromatic Transposable Elements as a Consequence of Nuclear Lamina Dysfunction. Cavaliere V, et al. Cells, 2020 Mar 5. PMID 32151001, Free PMC Article
  2. Regulated chromatin domain comprising cluster of co-expressed genes in Drosophila melanogaster. Kalmykova AI, et al. Nucleic Acids Res, 2005. PMID 15755746, Free PMC Article
  3. Large clusters of co-expressed genes in the Drosophila genome. Boutanaev AM, et al. Nature, 2002 Dec 12. PMID 12478293
  4. Role of histone deacetylases in gene regulation at nuclear lamina. Milon BC, et al. PLoS One, 2012. PMID 23226217, Free PMC Article
  5. Transcriptional regulation by Modulo integrates meiosis and spermatid differentiation in male germ line. Mikhaylova LM, et al. Proc Natl Acad Sci U S A, 2006 Aug 8. PMID 16877538, Free PMC Article

See all (25) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
Caldesmon-related protein
Names
CG13580-PA
Crtp-PA
caldesmon-related testes protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    24494518..24497024
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_079997.4 → NP_524736.1  Caldesmon-related protein [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_524736.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q32KC2, Q9W164
    Related
    FBpp0072206
    Conserved Domains (2) summary
    PTZ00121
    Location:243 → 461
    PTZ00121; MAEBL; Provisional
    PHA03307
    Location:575 → 745
    PHA03307; transcriptional regulator ICP4; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8MSL9 Q8MSL9
Q9U484 Q9U484
Q9W164 Q9W164

Gene LinkOut

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