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tob2.S transducer of ERBB2, 2 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 447135, updated on 27-Dec-2024

Summary

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Official Symbol
tob2.S
Official Full Name
transducer of ERBB2, 2 S homeolog
Primary source
Xenbase:XB-GENE-17346855
Locus tag
XELAEV_18025667mg
See related
EnsemblRapid:ENSXLAG00005005738 AllianceGenome:Xenbase:XB-GENE-17346855
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
tob4; tobl; trob2
Summary
Orthologous to human TOB2 (transducer of ERBB2, 2). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See tob2.S in Genome Data Viewer
Location:
chromosome: 4S
Exon count:
2
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 4S NC_054378.1 (100605628..100615067, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 4S NC_030731.1 (94283527..94292964, complement)

Chromosome 4S - NC_054378.1Genomic Context describing neighboring genes Neighboring gene Josephin domain containing 1 S homeolog Neighboring gene GTP binding protein 1 S homeolog Neighboring gene PHD finger protein 5A S homeolog Neighboring gene aconitase 2 S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC85389

General protein information

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Preferred Names
transducer of ERBB2, 2 S homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001093843.2 → NP_001087312.1  transducer of ERBB2, 2 S homeolog

    See identical proteins and their annotated locations for NP_001087312.1

    Status: PROVISIONAL

    Source sequence(s)
    BC078542
    UniProtKB/TrEMBL
    A0A974D153, Q66KV8
    Related
    ENSXLAP00005017048.1, ENSXLAT00005017344.1
    Conserved Domains (1) summary
    pfam07742
    Location:1 → 112
    BTG; BTG family

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054378.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    100605628..100615067 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

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