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CH64_RS16140 glycyl-radical enzyme activating protein [ Yersinia rohdei ]

Gene ID: 45568537, updated on 10-Dec-2024

Summary

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Gene symbol
CH64_RS16140
Gene description
glycyl-radical enzyme activating protein
Locus tag
CH64_RS16140
Gene type
protein coding
Organism
Yersinia rohdei (strain: YRA)
Lineage
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia
Old locus tag
CH64_3264
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Genomic context

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NZ_CP009787.1Genomic Context describing neighboring genes Neighboring gene thiamine/thiamine pyrophosphate ABC transporter permease ThiP Neighboring gene thiamine ABC transporter substrate binding subunit Neighboring gene HTH-type transcriptional regulator SgrR Neighboring gene formate C-acetyltransferase/glycerol dehydratase family glycyl radical enzyme Neighboring gene sugar efflux transporter

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP009787.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genes involved in the anaerobic degradation of toluene in a denitrifying bacterium, strain EbN1. Kube M, et al. Arch Microbiol, 2004 Mar. PMID 14735297
  2. Molecular characterization of the 1,3-propanediol (1,3-PD) operon of Clostridium butyricum. Raynaud C, et al. Proc Natl Acad Sci U S A, 2003 Apr 29. PMID 12704244, Free PMC Article
  3. Subunit composition of the glycyl radical enzyme p-hydroxyphenylacetate decarboxylase. A small subunit, HpdC, is essential for catalytic activity. Andrei PI, et al. Eur J Biochem, 2004 Jun. PMID 15153112

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
glycyl-radical enzyme activating protein
WP_004716086.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP009787.1 Reference assembly

    Range
    3659779..3660678
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_004716086.1 glycyl-radical enzyme activating protein [Yersinia rohdei]

    See identical proteins and their annotated locations for WP_004716086.1

    UniProtKB/TrEMBL
    A0A0U1HW53
    Conserved Domains (3) summary
    TIGR02494
    Location:2 → 292
    PFLE_PFLC; glycyl-radical enzyme activating protein
    pfam13370
    Location:47 → 97
    Fer4_13; 4Fe-4S single cluster domain of Ferredoxin I
    cl18962
    Location:89 → 299
    Radical_SAM; Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster. ...
Nucleotide Protein
Heading Accession and Version

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