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tssK type VI secretion system baseplate subunit TssK [ Burkholderia glumae LMG 2196 = ATCC 33617 ]

Gene ID: 45693576, updated on 10-Oct-2024

Summary

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Gene symbol
tssK
Gene description
type VI secretion system baseplate subunit TssK
Locus tag
KS03_RS02275
Gene type
protein coding
Organism
Burkholderia glumae LMG 2196 = ATCC 33617 (strain: ATCC 33617, nat-host: Oryza sativa, culture-collection: ATCC:33617, type-material: type strain of Burkholderia glumae)
Lineage
Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia
Old locus tag
KS03_3496
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Genomic context

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Location:
chromosome: II

II - NZ_CP009434.1Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene type VI secretion system membrane subunit TssM Neighboring gene type VI secretion system protein TssL, long form Neighboring gene type VI secretion system tube protein Hcp Neighboring gene type VI secretion system lipoprotein TssJ Neighboring gene type VI secretion system contractile sheath large subunit

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP009434.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Type VI secretion TssK baseplate protein exhibits structural similarity with phage receptor-binding proteins and evolved to bind the membrane complex. Nguyen VS, et al. Nat Microbiol, 2017 Jun 26. PMID 28650463
  2. In vivo expression technology identifies a type VI secretion system locus in Burkholderia pseudomallei that is induced upon invasion of macrophages. Shalom G, et al. Microbiology (Reading), 2007 Aug. PMID 17660433
  3. A virulence locus of Pseudomonas aeruginosa encodes a protein secretion apparatus. Mougous JD, et al. Science, 2006 Jun 9. PMID 16763151, Free PMC Article
  4. Complete genome sequences for 59 burkholderia isolates, both pathogenic and near neighbor. Johnson SL, et al. Genome Announc, 2015 Apr 30. PMID 25931592, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
type VI secretion system baseplate subunit TssK

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP009434.1 Reference assembly

    Range
    211728..213077 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_012733031.1 type VI secretion system baseplate subunit TssK [Burkholderia glumae]

    See identical proteins and their annotated locations for WP_012733031.1

    UniProtKB/TrEMBL
    A0AAP9XY71
Nucleotide Protein
Heading Accession and Version