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RIN2 Ras and Rab interactor 2 [ Pan troglodytes (chimpanzee) ]

Gene ID: 458123, updated on 3-Dec-2024

Summary

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Official Symbol
RIN2provided by VGNC
Official Full Name
Ras and Rab interactor 2provided by VGNC
Primary source
VGNC:VGNC:6256
Locus tag
CK820_G0035131
See related
Ensembl:ENSPTRG00000013298
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See RIN2 in Genome Data Viewer
Location:
chromosome: 21
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 21 NC_072419.2 (26281446..26532684)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 20 NC_072418.1 (26313440..26564432)

Chromosome 21 - NC_072419.2Genomic Context describing neighboring genes Neighboring gene SCP2D1 antisense RNA 1 Neighboring gene SCP2 sterol binding domain containing 1 Neighboring gene solute carrier family 24 member 3 Neighboring gene collagen, type I, alpha 1a Neighboring gene large ribosomal subunit protein uL11-like Neighboring gene uncharacterized LOC134809192 Neighboring gene N-alpha-acetyltransferase 20, NatB catalytic subunit Neighboring gene crooked neck pre-mRNA splicing factor 1 Neighboring gene cilia and flagella associated protein 61

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endocytic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras and Rab interactor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072419.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    26281446..26532684
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016937522.4 → XP_016793011.3  ras and Rab interactor 2 isoform X1

    UniProtKB/TrEMBL
    A0A2J8KWV3, A0A6D2Y7F5, K7D8D8

  2. XM_063803173.1 → XP_063659243.1  ras and Rab interactor 2 isoform X1

    UniProtKB/TrEMBL
    A0A2J8KWV3, A0A6D2Y7F5, K7D8D8

  3. XM_024352161.3 → XP_024207929.2  ras and Rab interactor 2 isoform X2

    UniProtKB/TrEMBL
    A0A2J8KWV3, A0A6D2Y7F5, K7D8D8

  4. XM_063803172.1 → XP_063659242.1  ras and Rab interactor 2 isoform X1

    UniProtKB/TrEMBL
    A0A2J8KWV3, A0A6D2Y7F5, K7D8D8

  5. XM_016937523.4 → XP_016793012.2  ras and Rab interactor 2 isoform X3

    UniProtKB/TrEMBL
    A0A2J8KWV3, A0A6D2Y7F5, K7D8D8

  6. XM_016937524.4 → XP_016793013.2  ras and Rab interactor 2 isoform X1

    UniProtKB/TrEMBL
    A0A2J8KWV3, A0A6D2Y7F5, K7D8D8

  7. XM_009436893.5 → XP_009435168.3  ras and Rab interactor 2 isoform X1

    UniProtKB/TrEMBL
    A0A2J8KWV3, A0A6D2Y7F5, K7D8D8

  8. XM_054674573.2 → XP_054530548.1  ras and Rab interactor 2 isoform X4

    UniProtKB/TrEMBL
    A0A2J8KWV3, A0A6D2Y7F5, K7D8D8

  9. XM_054674574.2 → XP_054530549.1  ras and Rab interactor 2 isoform X5

    UniProtKB/TrEMBL
    A0A2J8KWV3, A0A6D2Y7F5, K7D8D8
Nucleotide Protein
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