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msopa male-specific opa containing gene [ Drosophila melanogaster (fruit fly) ]

Gene ID: 45962, updated on 9-Dec-2024

Summary

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Official Symbol
msopaprovided by FlyBase
Official Full Name
male-specific opa containing geneprovided by FlyBase
Primary source
FLYBASE:FBgn0004414
Locus tag
Dmel_CG14560
See related
AllianceGenome:FB:FBgn0004414
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG14560; Dmel\CG14560
Summary
Involved in sexual reproduction. Located in extracellular space. Is expressed in several structures, including adult hemolymph; epithelial tube; female reproductive system; ovary; and uterus. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

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See msopa in Genome Data Viewer
Location:
79B2-79B3; 3-47 cM
Exon count:
1
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (22082720..22083367)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (22075820..22076467)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene Ribosomal protein LP0 Neighboring gene Seminal fluid protein 79 Neighboring gene long non-coding RNA:CR45236 Neighboring gene olf413 Neighboring gene long non-coding RNA:CR45971

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A Drosophila gene containing the opa repetitive element is exclusively expressed in adult male abdomens. Grabowski DT, et al. Nucleic Acids Res, 1991 Apr 11. PMID 1674131, Free PMC Article
  2. An adult male specific gene in Drosophila containing the repetitive element opa. Grabowski DT, et al. Biochim Biophys Acta, 1991 Aug 27. PMID 1883837
  3. Associations between sperm competition and natural variation in male reproductive genes on the third chromosome of Drosophila melanogaster. Fiumera AC, et al. Genetics, 2007 Jun. PMID 17435238, Free PMC Article
  4. Fates and targets of male accessory gland proteins in mated female Drosophila melanogaster. Ravi Ram K, et al. Insect Biochem Mol Biol, 2005 Sep. PMID 15979005
  5. Seminal fluid gene expression and reproductive fitness in Drosophila melanogaster. Patlar B, et al. BMC Ecol Evol, 2022 Feb 23. PMID 35196983, Free PMC Article

See all (35) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in defense response ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
involved_in sexual reproduction HEP PubMed 
Component Evidence Code Pubs
located_in extracellular space HDA PubMed 
located_in extracellular space ISM
Inferred from Sequence Model
more info
 PubMed 

General protein information

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Preferred Names
male-specific opa containing gene
Names
CG14560-PA
CG14560-PB
dromsopa
drosophila male specific opa containing gene
msopa-PA
msopa-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    22082720..22083367
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001275274.1 → NP_001262203.1  male-specific opa containing gene, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001262203.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P23488, Q9VNV8
    UniProtKB/TrEMBL
    M9PIK6, Q4V3I7

  2. NM_080120.3 → NP_524859.2  male-specific opa containing gene, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_524859.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P23488, Q9VNV8
    UniProtKB/TrEMBL
    M9PIK6, Q4V3I7
    Related
    FBpp0078135
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
M9PIK6 M9PIK6
P23488.2 P23488

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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