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A9237_RS02440 heparinase II/III family protein [ Vibrio owensii ]

Gene ID: 47098651, updated on 17-Dec-2024

Summary

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Gene symbol
A9237_RS02440
Gene description
heparinase II/III family protein
Locus tag
A9237_RS02440
Gene type
protein coding
Organism
Vibrio owensii (strain: XSBZ03)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio
Old locus tag
A9237_02440
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Genomic context

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Location:
chromosome: 1

1 - NZ_CP019959.1Genomic Context describing neighboring genes Neighboring gene sugar kinase Neighboring gene cupin domain-containing protein Neighboring gene heparinase II/III family protein Neighboring gene polysaccharide lyase family 7 protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP019959.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Isolation and expression in Escherichia coli of hepB and hepC, genes coding for the glycosaminoglycan-degrading enzymes heparinase II and heparinase III, respectively, from Flavobacterium heparinum. Su H, et al. Appl Environ Microbiol, 1996 Aug. PMID 8702264, Free PMC Article
  2. Structural basis of heparan sulfate-specific degradation by heparinase III. Dong W, et al. Protein Cell, 2012 Dec. PMID 23011846, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
heparinase II/III family protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP019959.1 Reference assembly

    Range
    557649..559814
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_078607538.1 heparinase II/III family protein [Vibrio owensii]

    UniProtKB/TrEMBL
    A0AAU9PZ19
    Conserved Domains (2) summary
    cl00179
    Location:44 → 275
    AlgLyase; Alginate Lyase A1-III; enzymatically depolymerizes alginate, a complex copolymer of beta-D-mannuronate and alpha-L-guluronate, by cleaving the beta-(1,4) glycosidic bond.
    cl26829
    Location:367 → 526
    Hepar_II_III; Heparinase II/III-like protein
Nucleotide Protein
Heading Accession and Version