U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

dapF diaminopimelate epimerase [ Pseudomonas veronii ]

Gene ID: 47559485, updated on 11-Dec-2024

Summary

Go to the top of the page Help
Gene symbol
dapF
Gene description
diaminopimelate epimerase
Locus tag
PverR02_RS30515
Gene type
protein coding
Organism
Pseudomonas veronii (strain: R02, nat-host: Solanum tuberosum)
Lineage
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
Old locus tag
PverR02_30395
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help

NZ_CP018420.1Genomic Context describing neighboring genes Neighboring gene LPS translocon maturation chaperone LptM Neighboring gene diaminopimelate decarboxylase Neighboring gene DUF484 family protein Neighboring gene tyrosine recombinase XerC Neighboring gene HAD family hydrolase

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NZ_CP018420.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Characterization of Mycobacterium tuberculosis diaminopimelic acid epimerase: paired cysteine residues are crucial for racemization. Usha V, et al. FEMS Microbiol Lett, 2008 Mar. PMID 18269631
  2. Dimerization of bacterial diaminopimelate epimerase is essential for catalysis. Hor L, et al. J Biol Chem, 2013 Mar 29. PMID 23426375, Free PMC Article
  3. Chemical mechanism of Haemophilus influenzae diaminopimelate epimerase. Koo CW, et al. Biochemistry, 1999 Apr 6. PMID 10194362

GeneRIFs: Gene References Into Functions

General protein information

Go to the top of the page Help
Preferred Names
diaminopimelate epimerase
WP_079444918.1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP018420.1 Reference assembly

    Range
    6622736..6623566
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_079444918.1 diaminopimelate epimerase [Pseudomonas veronii]

    Conserved Domains (1) summary
    PRK00450
    Location:1 → 276
    dapF; diaminopimelate epimerase; Provisional
Nucleotide Protein
Heading Accession and Version