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LAC1 Lactose permease [ Scheffersomyces stipitis CBS 6054 ]

Gene ID: 4837244, updated on 21-Dec-2023

Summary

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Gene symbol
LAC1
Gene description
Lactose permease
Locus tag
PICST_30035
Gene type
protein coding
RNA name
Lactose permease
RefSeq status
PROVISIONAL
Organism
Scheffersomyces stipitis CBS 6054 (strain: CBS 6054)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Scheffersomyces
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Genomic context

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See LAC1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
1
Sequence:
Chromosome: 2; NC_009042.1 (1781196..1782860, complement)

Chromosome 2 - NC_009042.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene monocarboxylate permease homolog Neighboring gene Beta-galactosidase (Lactase) Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009042.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the lignocellulose-bioconverting and xylose-fermenting yeast Pichia stipitis. Jeffries TW, et al. Nat Biotechnol, 2007 Mar. PMID 17334359
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carbohydrate:proton symporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
Lactose permease
XP_001383110.1
  • go_component integral to membrane
    go_funtion transporter activity
    go_process transport

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009042.1 Reference assembly

    Range
    1781196..1782860 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001383073.1 → XP_001383110.1  Lactose permease [Scheffersomyces stipitis CBS 6054]

    See identical proteins and their annotated locations for XP_001383110.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A3LPQ5
    Conserved Domains (2) summary
    cd06174
    Location:58 → 498
    MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
    TIGR00879
    Location:48 → 509
    SP; MFS transporter, sugar porter (SP) family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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