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HMI1 ATP-dependent DNA helicase HMI1, mitochondrial precursor [ Scheffersomyces stipitis CBS 6054 ]

Gene ID: 4852040, updated on 21-Dec-2023

Summary

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Gene symbol
HMI1
Gene description
ATP-dependent DNA helicase HMI1, mitochondrial precursor
Locus tag
PICST_29314
Gene type
protein coding
RNA name
ATP-dependent DNA helicase HMI1, mitochondrial precursor
RefSeq status
PROVISIONAL
Organism
Scheffersomyces stipitis CBS 6054 (strain: CBS 6054)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Scheffersomyces
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Genomic context

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See HMI1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_009068.1 (3474721..3477315)

Chromosome 1 - NC_009068.1Genomic Context describing neighboring genes Neighboring gene DNA replication factor C Neighboring gene suppressor of actin mutation Neighboring gene regulator of Ty1 Transposition Neighboring gene similar to CSM1 Chromosome segregation in meiosis

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009068.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the lignocellulose-bioconverting and xylose-fermenting yeast Pichia stipitis. Jeffries TW, et al. Nat Biotechnol, 2007 Mar. PMID 17334359
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3'-5' DNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in recombinational repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
ATP-dependent DNA helicase HMI1, mitochondrial precursor

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009068.1 Reference assembly

    Range
    3474721..3477315
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001386962.1 → XP_001386999.2  ATP-dependent DNA helicase HMI1, mitochondrial precursor [Scheffersomyces stipitis CBS 6054]

    See identical proteins and their annotated locations for XP_001386999.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A3GIE1
    Conserved Domains (3) summary
    COG0210
    Location:81 → 773
    UvrD; Superfamily I DNA or RNA helicase [Replication, recombination and repair]
    pfam13538
    Location:699 → 758
    UvrD_C_2; UvrD-like helicase C-terminal domain
    cl21455
    Location:82 → 361
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
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