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COX16 Cytochrome oxidase assembly [ Scheffersomyces stipitis CBS 6054 ]

Gene ID: 4852044, updated on 21-Dec-2023

Summary

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Gene symbol
COX16
Gene description
Cytochrome oxidase assembly
Locus tag
PICST_53528
Gene type
protein coding
RNA name
Cytochrome oxidase assembly
RefSeq status
PROVISIONAL
Organism
Scheffersomyces stipitis CBS 6054 (strain: CBS 6054)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Scheffersomyces
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Genomic context

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See COX16 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Sequence:
Chromosome: 1; NC_009068.1 (3482628..3483017, complement)

Chromosome 1 - NC_009068.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene similar to CSM1 Chromosome segregation in meiosis Neighboring gene hyphally regulated cell wall protein Neighboring gene Dihydroxyacetone kinase 1 (Glycerone kinase 1) (DHA kinase 1)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009068.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the lignocellulose-bioconverting and xylose-fermenting yeast Pichia stipitis. Jeffries TW, et al. Nat Biotechnol, 2007 Mar. PMID 17334359
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in mitochondrial cytochrome c oxidase assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
Cytochrome oxidase assembly

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009068.1 Reference assembly

    Range
    3482628..3483017 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001387202.1 → XP_001387239.1  Cytochrome oxidase assembly [Scheffersomyces stipitis CBS 6054]

    See identical proteins and their annotated locations for XP_001387239.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A3GIE5
    Conserved Domains (1) summary
    pfam14138
    Location:37 → 114
    COX16; Cytochrome c oxidase assembly protein COX16
Nucleotide Protein
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