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DHA1 Dihydroxyacetone synthase (DHAS) (TKL2) (Formaldehyde transketolase) (Glycerone synthase) [ Scheffersomyces stipitis CBS 6054 ]

Gene ID: 4852049, updated on 21-Dec-2023

Summary

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Gene symbol
DHA1
Gene description
Dihydroxyacetone synthase (DHAS) (TKL2) (Formaldehyde transketolase) (Glycerone synthase)
Locus tag
PICST_53327
Gene type
protein coding
RNA name
Dihydroxyacetone synthase (DHAS) (TKL2) (Formaldehyde transketolase) (Glycerone synthase)
RefSeq status
PROVISIONAL
Organism
Scheffersomyces stipitis CBS 6054 (strain: CBS 6054)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Scheffersomyces
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Genomic context

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See DHA1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_009068.1 (3503563..3505665)

Chromosome 1 - NC_009068.1Genomic Context describing neighboring genes Neighboring gene Sugar transporter Neighboring gene Sorbitol dehydrogenase (L-iditol 2-dehydrogenase) Neighboring gene fungal transcriptional regulatory protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009068.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the lignocellulose-bioconverting and xylose-fermenting yeast Pichia stipitis. Jeffries TW, et al. Nat Biotechnol, 2007 Mar. PMID 17334359
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transketolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in pentose-phosphate shunt IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
Dihydroxyacetone synthase (DHAS) (TKL2) (Formaldehyde transketolase) (Glycerone synthase)
XP_001387002.2
  • Dihydroxyacetone synthase (DHAS) (Formaldehyde transketolase) (Glycerone synthase) (TKL) (TKT) (TK 1)

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009068.1 Reference assembly

    Range
    3503563..3505665
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001386965.1 → XP_001387002.2  Dihydroxyacetone synthase (DHAS) (TKL2) (Formaldehyde transketolase) (Glycerone synthase) [Scheffersomyces stipitis CBS 6054]

    See identical proteins and their annotated locations for XP_001387002.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A3GIF0
    Conserved Domains (4) summary
    cd07033
    Location:371 → 545
    TPP_PYR_DXS_TK_like; Pyrimidine (PYR) binding domain of 1-deoxy-D-xylulose-5-phosphate synthase (DXS), transketolase (TK), and related proteins
    PTZ00089
    Location:25 → 684
    PTZ00089; transketolase; Provisional
    pfam02780
    Location:577 → 675
    Transketolase_C; Transketolase, C-terminal domain
    cl01629
    Location:25 → 351
    TPP_enzymes; Thiamine pyrophosphate (TPP) enzyme family, TPP-binding module; found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. These enzymes include, among others, the E1 components of the pyruvate, the acetoin and ...
Nucleotide Protein
Heading Accession and Version

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