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NimC3 Nimrod C3 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 48772, updated on 4-Jan-2025

Summary

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Official Symbol
NimC3provided by FlyBase
Official Full Name
Nimrod C3provided by FlyBase
Primary source
FLYBASE:FBgn0001967
Locus tag
Dmel_CG16880
See related
AllianceGenome:FB:FBgn0001967
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
BG:DS05899.2; br30; CG16880; Dmel\CG16880; I(2)34Fa; l(2)34Fa; l(2)br30; l(2)k00811; l34Fa; nimC3
Summary
Predicted to be involved in immune response and phagocytosis. Predicted to be located in membrane. Predicted to be active in plasma membrane. [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
all
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Genomic context

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See NimC3 in Genome Data Viewer
Location:
34F1-34F1; 2-50 cM
Exon count:
1
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (14019357..14020208, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (14019357..14020208, complement)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene transfer RNA:Glutamine-CTG 4-1 Neighboring gene bubblegum Neighboring gene antisense RNA:CR44849 Neighboring gene long non-coding RNA:CR45352 Neighboring gene long non-coding RNA:CR31840

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Analysis of ENU-induced mutations at the Adh locus in Drosophila melanogaster. Fossett NG, et al. Mutat Res, 1990 Jul. PMID 2114535
  2. Evolution of genes and repeats in the Nimrod superfamily. Somogyi K, et al. Mol Biol Evol, 2008 Nov. PMID 18703524
  3. Nimrod, a putative phagocytosis receptor with EGF repeats in Drosophila plasmatocytes. Kurucz E, et al. Curr Biol, 2007 Apr 3. PMID 17363253
  4. A selective screen to recover chromosomal deletions and duplications in Drosophila melanogaster. Gubb D, et al. Genetics, 1988 Jun. PMID 3135239, Free PMC Article
  5. A conserved gene cluster as a putative functional unit in insect innate immunity. Somogyi K, et al. FEBS Lett, 2010 Nov 5. PMID 20951134

See all (46) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in immune response IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in phagocytosis IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in phagocytosis ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane ISM
Inferred from Sequence Model
more info
  
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
nimrod C3
Names
CG16880-PB
NimC3-PB
lethal (2) 34Fa

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    14019357..14020208 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_080189.5 → NP_524928.2  nimrod C3 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_524928.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9N6X5, Q9VJU2
    Conserved Domains (1) summary
    pfam09402
    Location:85 → 212
    MSC; Man1-Src1p-C-terminal domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VJU2 Q9VJU2

Gene LinkOut

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