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Rpl15l1 ribosomal protein L15 like 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 498143, updated on 14-Nov-2024

Summary

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Official Symbol
Rpl15l1provided by RGD
Official Full Name
ribosomal protein L15 like 1provided by RGD
Primary source
RGD:1565131
See related
AllianceGenome:RGD:1565131
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1565131
Summary
Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be part of ribosomal subunit. [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in Spleen (RPKM 874.2), Thymus (RPKM 863.6) and 9 other tissues See more
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Genomic context

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See Rpl15l1 in Genome Data Viewer
Location:
12p11
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 12 NC_086030.1 (15340865..15341630)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 12 NC_051347.1 (10227181..10227989)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 12 NC_005111.4 (12203614..12204546)

Chromosome 12 - NC_086030.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103693619 Neighboring gene cleavage and polyadenylation specific factor 4 like 2 Neighboring gene U4 spliceosomal RNA Neighboring gene BAR/IMD domain containing adaptor protein 2 like 1 Neighboring gene ubiquitin-conjugating enzyme E2N, pseudogene 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables RNA binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in cytoplasmic translation IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
large ribosomal subunit protein eL15-like
Names
60S ribosomal protein L15-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086030.1 Reference GRCr8

    Range
    15340865..15341630
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063271909.1 → XP_063127979.1  large ribosomal subunit protein eL15-like

Nucleotide Protein Strain
Heading Accession and Version

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