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C14h4orf19 similar to human chromosome 4 open reading frame 19 [ Rattus norvegicus (Norway rat) ]

Gene ID: 498368, updated on 2-Nov-2024

Summary

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Official Symbol
C14h4orf19provided by RGD
Official Full Name
similar to human chromosome 4 open reading frame 19provided by RGD
Primary source
RGD:1561612
See related
EnsemblRapid:ENSRNOG00000002191 AllianceGenome:RGD:1561612
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Orthologous to human C4orf19 (chromosome 4 open reading frame 19). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in Kidney (RPKM 243.8), Liver (RPKM 175.5) and 8 other tissues See more
Orthologs
human mouse all
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Genomic context

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See C14h4orf19 in Genome Data Viewer
Location:
14p11
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 14 NC_086032.1 (44740965..44832180, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 14 NC_051349.1 (44387386..44478344, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 14 NC_005113.4 (46050752..46134770, complement)

Chromosome 14 - NC_086032.1Genomic Context describing neighboring genes Neighboring gene serine/threonine/tyrosine interacting protein, pseudogene 2 Neighboring gene uncharacterized LOC100911506 Neighboring gene RELT-like 1 Neighboring gene NACHT and WD repeat domain containing 2 Neighboring gene autophagy cargo receptor like 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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Related articles in PubMed

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
uncharacterized protein C4orf19 homolog
Names
ADP/ATP translocase 3
ADP/ATP translocase 3-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001017500.1 → NP_001017500.1  uncharacterized protein C4orf19 homolog

    See identical proteins and their annotated locations for NP_001017500.1

    Status: PROVISIONAL

    Source sequence(s)
    BC079124
    UniProtKB/Swiss-Prot
    Q6AYA8
    UniProtKB/TrEMBL
    A6JDH8, A6JDI0
    Related
    ENSRNOP00000002982.4, ENSRNOT00000002982.7
    Conserved Domains (1) summary
    pfam15770
    Location:9 → 313
    DUF4699; Domain of unknown function (DUF4699)

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086032.1 Reference GRCr8

    Range
    44740965..44832180 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039092290.2 → XP_038948218.1  uncharacterized protein C4orf19 homolog isoform X1

    UniProtKB/Swiss-Prot
    Q6AYA8
    UniProtKB/TrEMBL
    A6JDH8, A6JDI0
    Conserved Domains (1) summary
    pfam15770
    Location:9 → 313
    DUF4699; Domain of unknown function (DUF4699)

  2. XM_039092291.2 → XP_038948219.1  uncharacterized protein C4orf19 homolog isoform X3

  3. XM_063273466.1 → XP_063129536.1  uncharacterized protein C4orf19 homolog isoform X2

Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6AYA8.1 GenPept UniProtKB/Swiss-Prot:Q6AYA8

Gene LinkOut

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