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NBR1l1 autophagy cargo receptor like 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 498369, updated on 17-Aug-2024

Summary

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Official Symbol
NBR1l1provided by RGD
Official Full Name
autophagy cargo receptor like 1provided by RGD
Primary source
RGD:1593179
See related
AllianceGenome:RGD:1593179
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Expression
Biased expression in Liver (RPKM 200.5), Kidney (RPKM 191.8) and 9 other tissues See more
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Genomic context

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See NBR1l1 in Genome Data Viewer
Location:
14p11
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 14 NC_086032.1 (45143494..45146793)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 14 NC_051349.1 (44791253..44793245)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 14 NC_005113.4 (46286168..46287954)

Chromosome 14 - NC_086032.1Genomic Context describing neighboring genes Neighboring gene PDCD10 and GCKIII kinases associated 1 Neighboring gene NACHT and WD repeat domain containing 2 Neighboring gene U2 spliceosomal RNA Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
next to BRCA1 gene 1 protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086032.1 Reference GRCr8

    Range
    45143494..45146793
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039092754.2 → XP_038948682.1  next to BRCA1 gene 1 protein-like

    Conserved Domains (1) summary
    cd14319
    Location:165 → 203
    UBA_NBR1; UBA domain of next to BRCA1 gene 1 protein (NBR1) and similar proteins
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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