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Tmem273 transmembrane protein 273 [ Rattus norvegicus (Norway rat) ]

Gene ID: 498580, updated on 27-Nov-2024

Summary

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Official Symbol
Tmem273provided by RGD
Official Full Name
transmembrane protein 273provided by RGD
Primary source
RGD:1561145
See related
EnsemblRapid:ENSRNOG00000042628 AllianceGenome:RGD:1561145
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1561145
Summary
Orthologous to human TMEM273 (transmembrane protein 273). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in Spleen (RPKM 37.3), Thymus (RPKM 26.3) and 8 other tissues See more
Orthologs
human mouse all
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Genomic context

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See Tmem273 in Genome Data Viewer
Location:
16p16
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 16 NC_086034.1 (8055930..8088280)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 16 NC_051351.1 (8049565..8081981)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 16 NC_005115.4 (9023387..9054664)

Chromosome 16 - NC_086034.1Genomic Context describing neighboring genes Neighboring gene dorsal root ganglia homeobox Neighboring gene similar to human chromosome 10 open reading frame 71 Neighboring gene uncharacterized LOC102547142 Neighboring gene uncharacterized LOC134482315 Neighboring gene family with sequence similarity 170, member B Neighboring gene V-set and transmembrane domain containing 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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Related articles in PubMed

  1. Normalization and subtraction: two approaches to facilitate gene discovery. Bonaldo MF, et al. Genome Res, 1996 Sep. PMID 8889548

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
transmembrane protein 273

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001134605.3 → NP_001128077.2  transmembrane protein 273 precursor

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000016
    UniProtKB/TrEMBL
    A6KFV3
    Related
    ENSRNOP00000106483.1, ENSRNOT00000151625.1
    Conserved Domains (1) summary
    pfam14986
    Location:17 → 76
    DUF4514; Domain of unknown function (DUF4514)

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086034.1 Reference GRCr8

    Range
    8055930..8088280
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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