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rpsD 30S ribosomal protein S4 [ Pseudoalteromonas carrageenovora ]

Gene ID: 49916802, updated on 3-Dec-2024

Summary

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Gene symbol
rpsD
Gene description
30S ribosomal protein S4
Locus tag
PC2016_RS01220
Gene type
protein coding
Organism
Pseudoalteromonas carrageenovora (strain: KCTC 22325, nat-host: red alga, culture-collection: KCTC:22325)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas
Old locus tag
PC2016_0232
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Genomic context

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Location:
chromosome: I

I - NZ_CP027523.1Genomic Context describing neighboring genes Neighboring gene 30S ribosomal protein S13 Neighboring gene 30S ribosomal protein S11 Neighboring gene DNA-directed RNA polymerase subunit alpha Neighboring gene 50S ribosomal protein L17

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP027523.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Recognition of 16S rRNA by ribosomal protein S4 from Bacillus stearothermophilus. Gerstner RB, et al. Biochemistry, 2001 Jun 19. PMID 11401563
  2. The rpsD gene, encoding ribosomal protein S4, is autogenously regulated in Bacillus subtilis. Grundy FJ, et al. J Bacteriol, 1991 Aug. PMID 1906866, Free PMC Article
  3. Cloning and analysis of the Bacillus subtilis rpsD gene, encoding ribosomal protein S4. Grundy FJ, et al. J Bacteriol, 1990 Nov. PMID 1699930, Free PMC Article
  4. Characterization of the Bacillus subtilis rpsD regulatory target site. Grundy FJ, et al. J Bacteriol, 1992 Nov. PMID 1400226, Free PMC Article
  5. Messenger RNA recognition by fragments of ribosomal protein S4. Baker AM, et al. J Biol Chem, 1995 Sep 29. PMID 7559430

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
30S ribosomal protein S4

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP027523.1 Reference assembly

    Range
    243278..243898
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_002959461.1 MULTISPECIES: 30S ribosomal protein S4 [Alteromonadales]

    See identical proteins and their annotated locations for WP_002959461.1

    UniProtKB/TrEMBL
    A0A063KMU5, A0A0Q0I3F1, A0A0W1LHI4, A0A136I2D7, A0A1I7D229, A0A1Q2GWR7, A0A290S7I2, A0A2K4X5D5, A0A317FPM9, A0A4P9J4C5, A0A5B0TIB5, A0A5S3SE25, A0A5S3W1U6, A0A5S3WD37, A0A7W2TQ71, A0A7W2U5B9, A0A7W4B909, A0A7X9U9N9, A0A8H9W423, A0A9W4VSI4, A0AA37W6F3, A0AAC9ZSV6, A0AAD0FXW1, A0AAE2MD01, A0AAU9HJU1, A0AAW3TIK7, A0AAW4CHV3, A0AAW7KSD9, A0AAW7L188, A0AAW7L5U0, F3BHY8, G7EFI0, G7EXV1
    Conserved Domains (1) summary
    PRK05327
    Location:1 → 206
    rpsD; 30S ribosomal protein S4; Validated
Nucleotide Protein
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