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Tstd3 thiosulfate sulfurtransferase like domain containing 3 [ Rattus norvegicus (Norway rat) ]

Gene ID: 500420, updated on 4-Jan-2025

Summary

Official Symbol
Tstd3provided by RGD
Official Full Name
thiosulfate sulfurtransferase like domain containing 3provided by RGD
Primary source
RGD:1563572
See related
EnsemblRapid:ENSRNOG00000028185 AllianceGenome:RGD:1563572
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Orthologous to human TSTD3 (thiosulfate sulfurtransferase like domain containing 3). [provided by Alliance of Genome Resources, Jan 2025]
Expression
Biased expression in Brain (RPKM 199.9), Adrenal (RPKM 194.5) and 9 other tissues See more
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Genomic context

See Tstd3 in Genome Data Viewer
Location:
5q21
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 5 NC_086023.1 (40091438..40101509, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 5 NC_051340.1 (35294652..35304093, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 5 NC_005104.4 (35892783..35902243, complement)

Chromosome 5 - NC_086023.1Genomic Context describing neighboring genes Neighboring gene PR/SET domain 13 Neighboring gene uncharacterized LOC120102842 Neighboring gene cyclin C Neighboring gene uncharacterized LOC134478949 Neighboring gene ubiquitin specific peptidase 45 Neighboring gene large ribosomal subunit protein eL30-like

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

General protein information

Preferred Names
thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 3
Names
thiosulfate sulfurtransferase (rhodanese)-like domain containing 3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001100797.1NP_001094267.1  thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 3

    Status: VALIDATED

    Source sequence(s)
    BC089864
    UniProtKB/TrEMBL
    A6IIE6, G3V8W9, Q3SWT2
    Related
    ENSRNOP00000029537.3, ENSRNOT00000030559.7
    Conserved Domains (1) summary
    cd01519
    Location:43148
    RHOD_HSP67B2; Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086023.1 Reference GRCr8

    Range
    40091438..40101509 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063288207.1XP_063144277.1  thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 3 isoform X1

    UniProtKB/TrEMBL
    A6IIE6, G3V8W9, Q3SWT2