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Tmem51 transmembrane protein 51 [ Rattus norvegicus (Norway rat) ]

Gene ID: 500578, updated on 4-Jan-2025

Summary

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Official Symbol
Tmem51provided by RGD
Official Full Name
transmembrane protein 51provided by RGD
Primary source
RGD:1565452
See related
EnsemblRapid:ENSRNOG00000014197 AllianceGenome:RGD:1565452
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1565452
Summary
Orthologous to human TMEM51 (transmembrane protein 51). [provided by Alliance of Genome Resources, Jan 2025]
Expression
Biased expression in Kidney (RPKM 83.0), Spleen (RPKM 27.2) and 8 other tissues See more
Orthologs
human mouse all
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Genomic context

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See Tmem51 in Genome Data Viewer
Location:
5q36
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 5 NC_086023.1 (159608865..159658918, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 5 NC_051340.1 (154325853..154375882, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 5 NC_005104.4 (160570510..160620647, complement)

Chromosome 5 - NC_086023.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120103027 Neighboring gene EF-hand domain family, member D2 Neighboring gene forkhead associated phosphopeptide binding domain 1 Neighboring gene uncharacterized LOC134487032 Neighboring gene kazrin, periplakin interacting protein Neighboring gene uncharacterized LOC134487033

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
transmembrane protein 51

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001109273.1 → NP_001102743.1  transmembrane protein 51

    See identical proteins and their annotated locations for NP_001102743.1

    Status: PROVISIONAL

    Source sequence(s)
    CH473968
    UniProtKB/TrEMBL
    A6ITY1, D4AE69
    Related
    ENSRNOP00000019171.3, ENSRNOT00000019171.7
    Conserved Domains (1) summary
    pfam15345
    Location:7 → 236
    TMEM51; Transmembrane protein 51

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086023.1 Reference GRCr8

    Range
    159608865..159658918 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006239314.5 → XP_006239376.1  transmembrane protein 51 isoform X1

    See identical proteins and their annotated locations for XP_006239376.1

    UniProtKB/TrEMBL
    A6ITY1, D4AE69
    Conserved Domains (1) summary
    pfam15345
    Location:7 → 236
    TMEM51; Transmembrane protein 51

  2. XM_063288298.1 → XP_063144368.1  transmembrane protein 51 isoform X1

    UniProtKB/TrEMBL
    A6ITY1, D4AE69

  3. XM_006239313.5 → XP_006239375.1  transmembrane protein 51 isoform X1

    See identical proteins and their annotated locations for XP_006239375.1

    UniProtKB/TrEMBL
    A6ITY1, D4AE69
    Conserved Domains (1) summary
    pfam15345
    Location:7 → 236
    TMEM51; Transmembrane protein 51

  4. XM_006239315.5 → XP_006239377.1  transmembrane protein 51 isoform X1

    See identical proteins and their annotated locations for XP_006239377.1

    UniProtKB/TrEMBL
    A6ITY1, D4AE69
    Conserved Domains (1) summary
    pfam15345
    Location:7 → 236
    TMEM51; Transmembrane protein 51

  5. XM_063288299.1 → XP_063144369.1  transmembrane protein 51 isoform X1

    UniProtKB/TrEMBL
    A6ITY1, D4AE69
Nucleotide Protein Strain
Heading Accession and Version

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