Nucleotide/sugar transporter family protein [Arabidopsis thaliana (thale cress)] - Gene

Summary

Go to the top of the page Help

Official Full Name: Nucleotide/sugar transporter family protein
Primary source: TAIR:AT4G32272
Locus tag: AT4G32272
See related: Araport:AT4G32272
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help

See in Genome Data Viewer

Location:: chromosome: 4

Exon count:: 11

Sequence:: Chromosome: 4; NC_003075.7 (15576763..15579896, complement)

Chromosome 4 - NC_003075.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:: NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Homology

Orthologs from OrthoDB

NM_001085010.2

Supported by ESTs:

NM_001203958.1

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables nucleotide-sugar transmembrane transporter activity	IDA Inferred from Direct Assay more info	PubMed

Process	Evidence Code	Pubs
acts_upstream_of_or_within N-glycan fucosylation	IMP Inferred from Mutant Phenotype more info	PubMed
acts_upstream_of_or_within N-glycan processing	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in UDP-N-acetylglucosamine transmembrane transport	IDA Inferred from Direct Assay more info	PubMed
acts_upstream_of_or_within sphingolipid biosynthetic process	IMP Inferred from Mutant Phenotype more info	PubMed

Component	Evidence Code	Pubs
colocalizes_with Golgi apparatus	IDA Inferred from Direct Assay more info	PubMed
located_in Golgi membrane	IDA Inferred from Direct Assay more info	PubMed
located_in plasma membrane	ISM Inferred from Sequence Model more info
colocalizes_with trans-Golgi network	IDA Inferred from Direct Assay more info	PubMed

General protein information

Go to the top of the page Help

Preferred Names: Nucleotide/sugar transporter family protein

NP_001078479.1

Nucleotide/sugar transporter family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: UDP-N-acetylglucosamine (UAA) transporter family (TAIR:AT4G31600.1); Has 2058 Blast hits to 2056 proteins in 233 species: Archae - 0; Bacteria - 5; Metazoa - 459; Fungi - 367; Plants - 1044; Viruses - 0; Other Eukaryotes - 183 (source: NCBI BLink).

NP_001190887.1

Nucleotide/sugar transporter family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: UDP-N-acetylglucosamine (UAA) transporter family (TAIR:AT4G31600.1).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003075.7 Reference assembly

Range

15576763..15579896 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_001085010.2 → NP_001078479.1 Nucleotide/sugar transporter family protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/Swiss-Prot

A8MRY9, O49364

UniProtKB/TrEMBL

A0A178V0A9, A0A5S9XXX6, A0A7G2F2L9

Conserved Domains (1) summary

COG5070
Location:37 → 340

VRG4; Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
NM_001203958.1 → NP_001190887.1 Nucleotide/sugar transporter family protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A7G2F2L9, F4JU87

Conserved Domains (1) summary

COG5070
Location:64 → 355

VRG4; Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]