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Pabir2 PABIR family member 2 [ Rattus norvegicus (Norway rat) ]

Gene ID: 501647, updated on 4-Jan-2025

Summary

Symbol
Pabir2provided by RGD
Full Name
PABIR family member 2provided by RGD
Primary source
RGD:1560129
See related
EnsemblRapid:ENSRNOG00000002285 AllianceGenome:RGD:1560129
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Fam122b; RGD1560129
Summary
Predicted to enable protein serine/threonine phosphatase inhibitor activity. Orthologous to human PABIR2 (PABIR family member 2). [provided by Alliance of Genome Resources, Jan 2025]
Expression
Biased expression in Heart (RPKM 79.2), Lung (RPKM 40.4) and 9 other tissues See more
Orthologs
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Genomic context

See Pabir2 in Genome Data Viewer
Location:
Xq36
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) X NC_086039.1 (137908653..137935153, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) X NC_051356.1 (132989124..133015625, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) X NC_005120.4 (157853453..157879939)

Chromosome X - NC_086039.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102550366 Neighboring gene microRNA 322 Neighboring gene placenta enriched 1 Neighboring gene PABIR family member 3 Neighboring gene motile sperm domain containing 1

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

General protein information

Preferred Names
PABIR family member 2
Names
family with sequence similarity 122B
protein FAM122B
protein FAM122B-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001166586.1NP_001160058.1  PABIR family member 2

    See identical proteins and their annotated locations for NP_001160058.1

    Status: PROVISIONAL

    Source sequence(s)
    JAXUCZ010000021
    UniProtKB/TrEMBL
    A0A0G2JVV0
    Related
    ENSRNOP00000069628.2, ENSRNOT00000089777.3

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086039.1 Reference GRCr8

    Range
    137908653..137935153 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039099984.2XP_038955912.1  PABIR family member 2 isoform X1

    UniProtKB/TrEMBL
    A0A0G2JVV0
    Related
    ENSRNOP00000060417.5, ENSRNOT00000066874.5
  2. XM_039099989.2XP_038955917.1  PABIR family member 2 isoform X8

    UniProtKB/TrEMBL
    A0A0G2QBZ6
  3. XM_039099985.2XP_038955913.1  PABIR family member 2 isoform X2

    UniProtKB/TrEMBL
    A0A0G2JVV0
  4. XM_039099987.2XP_038955915.1  PABIR family member 2 isoform X5

    UniProtKB/TrEMBL
    A0A0G2QBZ6
  5. XM_039099986.2XP_038955914.1  PABIR family member 2 isoform X4

    UniProtKB/TrEMBL
    A0A0G2QBZ6
  6. XM_006257648.4XP_006257710.1  PABIR family member 2 isoform X7

    See identical proteins and their annotated locations for XP_006257710.1

    UniProtKB/TrEMBL
    A0A0G2QBZ6
  7. XM_006257643.5XP_006257705.1  PABIR family member 2 isoform X3

    See identical proteins and their annotated locations for XP_006257705.1

    UniProtKB/TrEMBL
    A0A0G2JVV0, A6KUJ4
    Related
    ENSRNOP00000106793.1, ENSRNOT00000139220.1
  8. XM_008773633.3XP_008771855.1  PABIR family member 2 isoform X6

    See identical proteins and their annotated locations for XP_008771855.1

    UniProtKB/TrEMBL
    A0A0G2QBZ6
  9. XM_039099988.1XP_038955916.1  PABIR family member 2 isoform X8

    UniProtKB/TrEMBL
    A0A0G2QBZ6
    Related
    ENSRNOP00000107407.1, ENSRNOT00000164346.1