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BomS5 Bomanin Short 5 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 50207, updated on 9-Dec-2024

Summary

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Official Symbol
BomS5provided by FlyBase
Official Full Name
Bomanin Short 5provided by FlyBase
Primary source
FLYBASE:FBgn0040734
Locus tag
Dmel_CG15065
See related
AllianceGenome:FB:FBgn0040734
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Bom065; CG15065; CT34936; Dmel\CG15065; IM2-like
Summary
Predicted to be involved in defense response. Predicted to be located in extracellular space. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See BomS5 in Genome Data Viewer
Location:
55C4-55C4; 2-85 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (18389959..18390242)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (14277464..14277747)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene Bomanin Short 3 Neighboring gene Bomanin Tailed 2 Neighboring gene Bomanin Short 6 Neighboring gene Imaginal disc growth factor 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. An effector Peptide family required for Drosophila toll-mediated immunity. Clemmons AW, et al. PLoS Pathog, 2015 Apr. PMID 25915418, Free PMC Article
  2. Short-Form Bomanins Mediate Humoral Immunity in Drosophila. Lindsay SA, et al. J Innate Immun, 2018. PMID 29920489, Free PMC Article
  3. Mycobacterium abscessus resists the innate cellular response by surviving cell lysis of infected phagocytes. Touré H, et al. PLoS Pathog, 2023 Mar. PMID 36972320, Free PMC Article
  4. The Toll pathway mediates Drosophila resilience to Aspergillus mycotoxins through specific Bomanins. Xu R, et al. EMBO Rep, 2023 Jan 9. PMID 36322050, Free PMC Article
  5. Identification of FGF-dependent genes in the Drosophila tracheal system. Stahl M, et al. Gene Expr Patterns, 2007 Jan. PMID 16949886

See all (57) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in defense response IEA
Inferred from Electronic Annotation
more info
  
involved_in defense response ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space ISM
Inferred from Sequence Model
more info
 PubMed 

General protein information

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Preferred Names
bomanin short 5
Names
BomS5-PA
CG15065-PA
bomanin 065
bomanin S5

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    18389959..18390242
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_144109.2 → NP_652366.1  bomanin short 5 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_652366.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A1ZB63, B7FNR2
    Related
    FBpp0085848
    Conserved Domains (1) summary
    pfam08194
    Location:1 → 36
    DIM; DIM protein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A1ZB63.1 A1ZB63

Gene LinkOut

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