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Rwdd4 RWD domain containing 4 [ Rattus norvegicus (Norway rat) ]

Gene ID: 502084, updated on 27-Nov-2024

Summary

Official Symbol
Rwdd4provided by RGD
Official Full Name
RWD domain containing 4provided by RGD
Primary source
RGD:1564132
See related
EnsemblRapid:ENSRNOG00000022500 AllianceGenome:RGD:1564132
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Rwdd4a
Summary
Orthologous to human RWDD4 (RWD domain containing 4). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in Kidney (RPKM 141.2), Adrenal (RPKM 132.7) and 9 other tissues See more
Orthologs
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Genomic context

See Rwdd4 in Genome Data Viewer
Location:
16q11
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 16 NC_086034.1 (51447384..51465718, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 16 NC_051351.1 (44714698..44733090, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 16 NC_005115.4 (47856522..47874921, complement)

Chromosome 16 - NC_086034.1Genomic Context describing neighboring genes Neighboring gene ERH, mRNA splicing and mitosis factor, pseudogene 2 Neighboring gene uncharacterized LOC134482503 Neighboring gene trafficking protein particle complex subunit 11 Neighboring gene uncharacterized LOC134482545 Neighboring gene uncharacterized LOC102551690 Neighboring gene small nucleolar RNA SNORA70

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

General protein information

Preferred Names
RWD domain-containing protein 4
Names
RWD domain containing 4A
family with sequence similarity 28, member A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001034994.1NP_001030166.1  RWD domain-containing protein 4

    See identical proteins and their annotated locations for NP_001030166.1

    Status: PROVISIONAL

    Source sequence(s)
    BC092581
    UniProtKB/Swiss-Prot
    Q569B7
    UniProtKB/TrEMBL
    A0A0G2K617, A6JPL3
    Related
    ENSRNOP00000033649.3, ENSRNOT00000035323.6
    Conserved Domains (1) summary
    pfam05773
    Location:4107
    RWD; RWD domain

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086034.1 Reference GRCr8

    Range
    51447384..51465718 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063275654.1XP_063131724.1  RWD domain-containing protein 4 isoform X1

    UniProtKB/TrEMBL
    A0A8I6AT52
  2. XM_063275655.1XP_063131725.1  RWD domain-containing protein 4 isoform X2