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GSPATT00003110001 uncharacterized protein [ Paramecium tetraurelia ]

Gene ID: 5041324, updated on 23-Nov-2023

Summary

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Gene symbol
GSPATT00003110001
Gene description
uncharacterized protein
Locus tag
GSPATT00003110001
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Paramecium tetraurelia (strain: Stock d4-2)
Lineage
Eukaryota; Sar; Alveolata; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium
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Genomic context

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See GSPATT00003110001 in Genome Data Viewer
Location:
chromosome: undetermined
Exon count:
2

NW_001799619.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_001799619.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Global trends of whole-genome duplications revealed by the ciliate Paramecium tetraurelia. Aury JM, et al. Nature, 2006 Nov 9. PMID 17086204
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables O-phosphoseryl-tRNA(Sec) selenium transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in conversion of seryl-tRNAsec to selenocys-tRNAsec IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in selenocysteine incorporation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001799619.1 Reference assembly

    Range
    282717..284145 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001455502.1 → XP_001455539.1  uncharacterized protein GSPATT00003110001 [Paramecium tetraurelia]

    See identical proteins and their annotated locations for XP_001455539.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0DYM5
    Conserved Domains (1) summary
    TIGR03531
    Location:12 → 462
    selenium_SpcS; O-phosphoseryl-tRNA(Sec) selenium transferase
Nucleotide Protein
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