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CG12617 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 50470, updated on 9-Dec-2024

Summary

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Official Symbol
CG12617provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0040996
Locus tag
Dmel_CG12617
See related
AllianceGenome:FB:FBgn0040996
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
38C.31; Dmel\CG12617
Summary
Is expressed in adult head and spermatozoon. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See CG12617 in Genome Data Viewer
Location:
38C4-38C4; 2-54 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (20294693..20295804)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (20294693..20295804)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR43414 Neighboring gene long non-coding RNA:CR43606 Neighboring gene spire

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and metabolomic architecture of variation in diet restriction-mediated lifespan extension in Drosophila. Jin K, et al. PLoS Genet, 2020 Jul. PMID 32644988, Free PMC Article
  2. Map position and expression of the genes in the 38 region of Drosophila. Butler H, et al. Genetics, 2001 Aug. PMID 11514449, Free PMC Article
  3. Next-generation large-scale binary protein interaction network for Drosophila melanogaster. Tang HW, et al. Nat Commun, 2023 Apr 15. PMID 37061542, Free PMC Article
  4. CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans. Wei P, et al. Genome Res, 2020 Jan. PMID 31722958, Free PMC Article
  5. Phylostratigraphic bias creates spurious patterns of genome evolution. Moyers BA, et al. Mol Biol Evol, 2015 Jan. PMID 25312911, Free PMC Article

See all (21) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein
Names
CG12617-PA
CG12617-PB
CG12617-PC

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    20294693..20295804
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001299169.1 → NP_001286098.1  uncharacterized protein Dmel_CG12617, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001286098.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    E0R7Q6, Q9VIN5

  2. NM_001299168.1 → NP_001286097.1  uncharacterized protein Dmel_CG12617, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001286097.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    E0R7Q6, Q9VIN5

  3. NM_144332.3 → NP_652589.1  uncharacterized protein Dmel_CG12617, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_652589.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    E0R7Q6, Q9VIN5
    Related
    FBpp0080883
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VIN5 Q9VIN5

Gene LinkOut

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