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FIU11_RS11470 TIGR01621 family pseudouridine synthase [ Vibrio furnissii ]

Gene ID: 50535778, updated on 6-Oct-2023

Summary

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Gene symbol
FIU11_RS11470
Gene description
TIGR01621 family pseudouridine synthase
Locus tag
FIU11_RS11470
Gene type
protein coding
Organism
Vibrio furnissii (strain: FDAARGOS_777, nat-host: NIST Mixed Microbial RM strain, culture-collection: ATCC:35016, type-material: type strain of Vibrio furnissii)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio
Old locus tag
FIU11_11470
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Genomic context

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Location:
chromosome: 1

1 - NZ_CP040990.1Genomic Context describing neighboring genes Neighboring gene dihydrodipicolinate synthase family protein Neighboring gene class I SAM-dependent methyltransferase Neighboring gene class II fumarate hydratase Neighboring gene sodium-dependent transporter

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP040990.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Functional effect of deletion and mutation of the Escherichia coli ribosomal RNA and tRNA pseudouridine synthase RluA. Raychaudhuri S, et al. J Biol Chem, 1999 Jul 2. PMID 10383384

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
TIGR01621 family pseudouridine synthase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP040990.1 Reference assembly

    Range
    2349561..2350256 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_014204936.1 MULTISPECIES: TIGR01621 family pseudouridine synthase [Vibrio]

    See identical proteins and their annotated locations for WP_014204936.1

    UniProtKB/TrEMBL
    A0A0Q2ME50
    Conserved Domains (1) summary
    cl00130
    Location:1 → 221
    PseudoU_synth; Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi)
Nucleotide Protein
Heading Accession and Version