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botR botulinum neurotoxin transcription-activating sigma factor BotR [ Clostridium botulinum A str. ATCC 3502 ]

Gene ID: 5185059, updated on 20-Nov-2023

Summary

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Gene symbol
botR
Gene description
botulinum neurotoxin transcription-activating sigma factor BotR
Locus tag
CBO_RS04140
Gene type
protein coding
Organism
Clostridium botulinum A str. ATCC 3502 (strain: ATCC 3502)
Lineage
Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae; Clostridium
Old locus tag
CBO0804
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Genomic context

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Sequence:
NC_009495.1 (905386..905922)

NC_009495.1Genomic Context describing neighboring genes Neighboring gene RICIN domain-containing protein Neighboring gene RICIN domain-containing protein Neighboring gene non-toxic nonhemagglutinin NTNH Neighboring gene botulinum neurotoxin subtype A1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009495.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Organization and regulation of the neurotoxin genes in Clostridium botulinum and Clostridium tetani. Raffestin S, et al. Anaerobe, 2004 Apr. PMID 16701505
  2. Regulation of toxin and bacteriocin gene expression in Clostridium by interchangeable RNA polymerase sigma factors. Dupuy B, et al. Mol Microbiol, 2006 May. PMID 16677313
  3. Nucleotide sequence and transcriptional analysis of the type A2 neurotoxin gene cluster in Clostridium botulinum. Dineen SS, et al. FEMS Microbiol Lett, 2004 Jun 1. PMID 15158256
  4. Genome sequence of a proteolytic (Group I) Clostridium botulinum strain Hall A and comparative analysis of the clostridial genomes. Sebaihia M, et al. Genome Res, 2007 Jul. PMID 17519437, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
botulinum neurotoxin transcription-activating sigma factor BotR

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009495.1 Reference assembly

    Range
    905386..905922
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_011948509.1 botulinum neurotoxin transcription-activating sigma factor BotR [Clostridium botulinum]

    See identical proteins and their annotated locations for WP_011948509.1

    UniProtKB/TrEMBL
    A5HZZ7, A7G1U7, O33870, Q57176
    Conserved Domains (1) summary
    TIGR03209
    Location:18 → 159
    P21_Cbot; clostridium toxin-associated regulator BotR
Nucleotide Protein
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