U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

FRMPD2 FERM and PDZ domain containing 2 [ Bos taurus (domestic cattle) ]

Gene ID: 520665, updated on 29-Jan-2025

Summary

Go to the top of the page Help
Official Symbol
FRMPD2provided by VGNC
Official Full Name
FERM and PDZ domain containing 2provided by VGNC
Primary source
VGNC:VGNC:50131
See related
BGD:BT16851; Ensembl:ENSBTAG00000005568
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See FRMPD2 in Genome Data Viewer
Location:
chromosome: 28
Exon count:
30
Annotation release Status Assembly Chr Location
RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 28 NC_037355.1 (42579887..42688363, complement)

Chromosome 28 - NC_037355.1Genomic Context describing neighboring genes Neighboring gene growth differentiation factor 10 Neighboring gene uncharacterized LOC132344152 Neighboring gene protein tyrosine phosphatase non-receptor type 20 Neighboring gene mitogen-activated protein kinase 8 Neighboring gene Rho GTPase activating protein 22

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_037355.1 Chromosome 28 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Dominette sequence data
  • BioProject: PRJNA294306
  • Analysis date: Tue Dec 17 08:57:05 2024

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
FERM and PDZ domain-containing protein 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037355.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    42579887..42688363 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010820735.3 → XP_010819037.2  FERM and PDZ domain-containing protein 2 isoform X3

    UniProtKB/TrEMBL
    A0A3Q1MGA7
    Related
    ENSBTAP00070023234.1, ENSBTAT00070039118.1
    Conserved Domains (5) summary
    smart00228
    Location:934 → 1022
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    smart00295
    Location:335 → 540
    B41; Band 4.1 homologues
    cd00992
    Location:760 → 844
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cl17171
    Location:536 → 633
    PH-like; Pleckstrin homology-like domain
    cl21453
    Location:6 → 188
    PKc_like; Protein Kinases, catalytic domain

  2. XM_015461087.3 → XP_015316573.2  FERM and PDZ domain-containing protein 2 isoform X4

    UniProtKB/TrEMBL
    A0A3Q1MGA7
    Related
    ENSBTAP00070023198.1, ENSBTAT00070039073.1
    Conserved Domains (5) summary
    smart00228
    Location:940 → 1028
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    smart00295
    Location:341 → 546
    B41; Band 4.1 homologues
    cd00992
    Location:766 → 850
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cl17171
    Location:542 → 639
    PH-like; Pleckstrin homology-like domain
    cl21453
    Location:12 → 194
    PKc_like; Protein Kinases, catalytic domain

  3. XM_015461085.3 → XP_015316571.2  FERM and PDZ domain-containing protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A3Q1MGA7
    Conserved Domains (5) summary
    smart00228
    Location:940 → 1028
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    smart00295
    Location:341 → 546
    B41; Band 4.1 homologues
    cd00992
    Location:766 → 850
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cl17171
    Location:542 → 639
    PH-like; Pleckstrin homology-like domain
    cl21453
    Location:12 → 194
    PKc_like; Protein Kinases, catalytic domain

  4. XM_059882706.1 → XP_059738689.1  FERM and PDZ domain-containing protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A3Q1MGA7
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials