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lectin-21Ca lectin-21Ca [ Drosophila melanogaster (fruit fly) ]

Gene ID: 53552, updated on 9-Dec-2024

Summary

Official Symbol
lectin-21Caprovided by FlyBase
Official Full Name
lectin-21Caprovided by FlyBase
Primary source
FLYBASE:FBgn0040107
Locus tag
Dmel_CG2826
See related
AllianceGenome:FB:FBgn0040107
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
AC 004573A; AC004573a; CG2826; Dmel\CG2826; Lectin-21Ca
Summary
Predicted to enable galactose binding activity and pattern recognition receptor activity. Involved in sexual reproduction. Predicted to be located in extracellular region. Predicted to be active in external side of plasma membrane. Orthologous to human CLEC3A (C-type lectin domain family 3 member A). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

See lectin-21Ca in Genome Data Viewer
Location:
21E2-21E2; 2-1.5 cM
Exon count:
1
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (624617..625556)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (624617..625556)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR44797 Neighboring gene long non-coding RNA:CR44798 Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR45369

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables carbohydrate binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables carbohydrate binding ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
enables galactose binding ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
enables pattern recognition receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
involved_in immune response IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in sexual reproduction IEP
Inferred from Expression Pattern
more info
PubMed 
Component Evidence Code Pubs
is_active_in external side of plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in extracellular region ISM
Inferred from Sequence Model
more info
 

General protein information

Preferred Names
lectin-21Ca
Names
CG2826-PA
Lectin21Ca
lectin-21Ca-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    624617..625556
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_144385.3NP_652642.2  lectin-21Ca [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_652642.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    B3DNH5, Q9VPS2
    Conserved Domains (1) summary
    cd00037
    Location:158265
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain