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IFM58399_07015 hypothetical protein [ Aspergillus lentulus ]

Gene ID: 54319172, updated on 31-Oct-2024

Summary

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Gene symbol
IFM58399_07015
Gene description
hypothetical protein
Locus tag
IFM58399_07015
Gene type
protein coding
RNA name
uncharacterized protein
RefSeq status
PROVISIONAL
Organism
Aspergillus lentulus (strain: IFM 58399, culture-collection: IFM<JPN>:58399)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus
Orthologs
Aspergillus fumigatus all
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Genomic context

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See IFM58399_07015 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
1

NW_022983913.1Genomic Context describing neighboring genes Neighboring gene ribonuclease H2 subunit A Neighboring gene peroxisomal membrane protein pex16 Neighboring gene zinc knuckle domain-containing protein (Byr3) Neighboring gene UPF0061 protein C20G4.05c

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022983913.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Y-form DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables damaged DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables double-strand/single-strand DNA junction binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables double-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables flap-structured DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA double-strand break processing involved in repair via single-strand annealing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in double-strand break repair via homologous recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in site of double-strand break IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_022983913.1 Reference assembly

    Range
    181011..183236 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033561410.1 → XP_033417301.1  uncharacterized protein IFM58399_07015 [Aspergillus lentulus]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0AAN4PUD0, A0AAN5YLP8
    Conserved Domains (1) summary
    pfam08573
    Location:593 → 703
    SAE2; DNA repair protein endonuclease SAE2/CtIP C-terminus
Nucleotide Protein
Heading Accession and Version

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