U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

IFM58399_09682 isoleucine--tRNA ligase, cytoplasmic [ Aspergillus lentulus ]

Gene ID: 54321784, updated on 31-Oct-2024

Summary

Go to the top of the page Help
Gene symbol
IFM58399_09682
Gene description
isoleucine--tRNA ligase, cytoplasmic
Locus tag
IFM58399_09682
Gene type
protein coding
RNA name
isoleucine--tRNA ligase, cytoplasmic
RefSeq status
PROVISIONAL
Organism
Aspergillus lentulus (strain: IFM 58399, culture-collection: IFM<JPN>:58399)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus
Orthologs
Aspergillus fumigatus all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See IFM58399_09682 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
2

NW_022983968.1Genomic Context describing neighboring genes Neighboring gene 5'-3' exoribonuclease 2 Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_022983968.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables aminoacyl-tRNA editing activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables isoleucine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in isoleucyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
isoleucine--tRNA ligase, cytoplasmic

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_022983968.1 Reference assembly

    Range
    44268..47565
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033564022.1 → XP_033419913.1  isoleucine--tRNA ligase, cytoplasmic [Aspergillus lentulus]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0AAN4TDP7
    Conserved Domains (1) summary
    PLN02882
    Location:4 → 1039
    PLN02882; aminoacyl-tRNA ligase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases