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Kdm4dl lysine (K)-specific demethylase 4D-like [ Mus musculus (house mouse) ]

Gene ID: 547035, updated on 2-Nov-2024

Summary

Official Symbol
Kdm4dlprovided by MGI
Official Full Name
lysine (K)-specific demethylase 4D-likeprovided by MGI
Primary source
MGI:MGI:3644125
See related
Ensembl:ENSMUSG00000098832 AllianceGenome:MGI:3644125
Gene type
pseudo
RefSeq status
INFERRED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm6017; Gm27205; EG547035
Summary
Enables histone demethylase activity. Acts upstream of or within blastocyst development. Predicted to be located in nucleus. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See Kdm4dl in Genome Data Viewer
Location:
9 A1; 9 4.04 cM
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (14362311..14363318, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (14451015..14452022, complement)

Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene sestrin 3 Neighboring gene endonuclease domain containing 1 Neighboring gene predicted gene, 34156 Neighboring gene STARR-seq mESC enhancer starr_23348 Neighboring gene lysine (K)-specific demethylase 4D Neighboring gene STARR-positive B cell enhancer ABC_E248 Neighboring gene CWC15 spliceosome-associated protein

Genomic regions, transcripts, and products

General gene information

Other Names

  • lysine (K)-specific demethylase 4D pseudogene

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables histone demethylase activity IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within blastocyst development IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
located_in nucleus IC
Inferred by Curator
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_020850.2 

    Range
    101..1108
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000075.7 Reference GRCm39 C57BL/6J

    Range
    14362311..14363318 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)